Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0471 ATGGCCGACGACGCCAAAAACAGAGGAAGTTACGACGCCGATCACCACCATAACCAACCTTATTATGGCACCTTTCAAGGCGTCGCCAACTACTATCCTCCTCATAACCCACCGCCCCATTCCGTTGTTGGTTACCCTCAGCCAATTCCACCGTCGCAACAACCACCTGCGTCTTATGATGCCCCCCACTATTATTACCAAGGCTACAACGCTCTTCCAGTTTATGCTGTTGCTGATGGAAGGCCTCTAAGAGAACATCGTCTTGCTTGCTGTGGACTTGGTTTGGGTTGGCTCTTGTTTTTGAGTGGTTTCATTCTTGGTGGCGTTCCCTGGTACATCGGAACTTTCATTCTACTATGCATACAAATGGATTACCGAGAAAAGCCTGGATTAATTGCATGCACAGTTGCTTATCACCAATACCAGGTTGTCGGTAGGGCTCTCCCTACTGAATCAGACCAGCACCCTAAGATTTACCGCATGAAGCTTTGGGCCACCAACGAGGTTCGCGCTAAGTCTAAGTTCTGGTACTTTTTGAGGAAGCTGAAGAAGGTTAAGAAGAGCAATGGTCAGGTCCTTGCTATCAATGAGATTTTCGAGAAGAACCCAACTAAGATTAAGAACTATGGAATTTGGTTGAGGTATCAGAGTAGGACTGGCTACCACAACATGTACAAGGAGTACCGTGACACCACTCTAAATGGTGCAGTGGAGGCTATGTACAATGAGATGGCTTCCCGCCATCGTGTCCGGTTCCCTTGCATTCAAATTATCAAGACTGCAACCATCGCGGCCAAGCTTTGCAAAAGAGAGAGCACCAAGCAATTCCATAACTCCAAAATCAAGTTCCCATTGGTGTACAAGAAGATTAGGCCACCAACAAGGAAGCTGAAGACCACATACAAGGCAAAGAAACCCAACTTGTTTATGTAA 933 0.4673 MADDAKNRGSYDADHHHNQPYYGTFQGVANYYPPHNPPPHSVVGYPQPIPPSQQPPASYDAPHYYYQGYNALPVYAVADGRPLREHRLACCGLGLGWLLFLSGFILGGVPWYIGTFILLCIQMDYREKPGLIACTVAYHQYQVVGRALPTESDQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYNEMASRHRVRFPCIQIIKTATIAAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKAKKPNLFM* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0471 310 PANTHER 60S RIBOSOMAL PROTEIN L18A 270 310 IPR028877 -
Lan16g0471 310 PANTHER 60S RIBOSOMAL PROTEIN L18A 135 269 IPR028877 -
Lan16g0471 310 SUPERFAMILY RplX-like 203 278 - -
Lan16g0471 310 Gene3D - 132 203 - -
Lan16g0471 310 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 139 260 IPR023573 GO:0003735|GO:0005840|GO:0006412
Lan16g0471 310 Hamap 50S ribosomal protein L18Ae [rpl18a]. 138 201 IPR028877 -
Lan16g0471 310 PANTHER 60S RIBOSOMAL PROTEIN L18A 270 310 - -
Lan16g0471 310 PANTHER 60S RIBOSOMAL PROTEIN L18A 135 269 - -
Lan16g0471 310 Gene3D - 204 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0471 Lan-Chr16 4624999 4632593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0471 138 310 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.173 9.37e-116 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0471 K02882 - rcu:8264126 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0471 16 4624999 4632593 Lan16g0471 16 4624999 4632593 ECH