Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0450 ATGAACCAGTACCACATCTACGAAGCCATTGGTCGCGGAAAATACTCGACCGTGTACAAAGGTAGAAAGAAGCAGACAATTGAATATTTCGCCATCAAAAGCGTCGATAAATCTCAGAAAAACAAGGTGCTTCAAGAAGTTAGGATTCTTCACTCTTTGGATCACCAAAATGTGCTCAAGTTCTATTCCTGGTATGAAACTTCTGCTCACCTATGGTTGGTGTTGGAGTATTGTGTTGGAGGAGATTTGCTTTCCATATTACGGCAGGACACTCAACTTCCAGAAGACTCAGTTCATGATCTTGCTTTTGACCTAGTCAAGGCTTTGCAGTTTTTACATTCAAATGGAATAATATATTGTGACCTGAAACCATCAAATATCCTACTGGATGAAAATGGACGTACTAAGCTATGTGATTTCGGTTTGGCTAGAAAGTTAAGAGATATATCAAAAACTCCATCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCGTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGACTTCTGGGCCTTAGGCTGTGTACTGTATGAATGTTATACTGGGAAGCCTCCCTTTTTGGGAAGAGAATTCACTCAGCTTGTAAAATCTATTCTTTCAGATCCAACTCCACCTCTCCCTGGTAATCCGAGTCGACCTTTTGTCAATTTAATTAATTCTTTGCTTGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCATTTTGGAGTACCAAATTGACTATGGTGCCTCTACCAGCTCAACTTGCATTTGATGATATGATAGAGCTACATGCTAAACCATGCTTACCAGAAAGGAATGGTGATAAATCTTCCCATAACAGGACCCCTCCCAAATATCGTGAAAAAGATGTAAAGGGGTTGATGAAGAAGGATGAAAGTTCCATTTTAGGTTCTAGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGCCACAGAACTCAGGCAAAGGTTTCTGGCAAAACAGCTGAAGTGAAGCAGAAAGGTCCTTCCAAAATTAGCAAGGTTGTGAATCTTTTGAGACTGTCAAGAATAGCAAAATCAAATTTGCAAAAAGAAAATGAGAAGGAAAACTATCGACGCCCCTTGCCTAACAGCTCTGAGAATGACTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAACACTGAAGATGATGCACCTGAAGAAACTGATGGCTTAGAACATACAACTTCCATACCTGATGAGAAAATGGACAATGGTGACCACAAACAGGGTAAAATAGAAGAGACTGCAAATAATATACACCAGTTGGACACTCCATCCATTGTTAACACACCTGTTTCACATGATCCGAGGTCAGTTGATCAAGAGTCAACTCCTGATTATCCTGATATATCTGCTATTTCTCCCAGTGTGAGCCCTCAGGTAAAGAAACATAGAGGTAAAGAAGAAGTAGGATCAGGCCTTGACTCTGAATCTTCAAGGTCATCTAGCAATCTCTCTCAAGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGATAAAGTCTCAGAAGTCATTCCTTCACTTCCTTTTGAGGCTTTGCAAGCATCTGATTTTGTCAAGTTGCCTAAAGAGCAATTGGAAGCAATCCTAAACAGGATTATTGCCATTTTGAATGGGAATACCAGCATTGGAGAGAAACAGAACTTGGTTAGGTACCTTGAGCTGTTAAGCAGTAATGCTGATGCAGCTAACATATTGACCAATGGACCAATAATGCTCATACTTGTAAAATTGCTTCGCCAGTCTAAGGCATTAGCCTTGCGTGTTCAACTTGCTTCACTGATTGGTCTGTTGATTCGGCACTCCACTTTTGTTGATGACAGTTTGGCTAATTCTGGAATTTTGGGTTCACTGACTGATGGCCTTAGAGACAAACAGGAAAAAGTGAGGAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCGACTCAAAATGCGGATTGCAGGGATAACAATCCACTTGAATCTCCATCGAAAGACAATAGAACTTCGGTTGGCTGGCAGGTTCCAAATTCATTAATATCTTTTGTGTCGTCAATGTTGAGGAAGGGAGAGGATGATTTGACTCAATTGTATGCATTGAGAACAGTTGAGAACGTTTGCAGCCAAGGAGGAACCTGGGTGGGACGTTTTAGCAGCCAAGATGTCATCAGTAATCTCTGCTATATCTATAGGGCTTCAGGAAAACAGGAGAGCATGAGGCTTACTGCAGGGTCATGTTTGGTGCGCTTGGTTCGTTTTAATCCTCCTAGCATTCAGTCAGTTATGGAGAAACTGTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGTAGTCCACGAGAGCAGCAAATAAGCTTAAATCTTCTAAACATGGCTATGCTTGGAAGTCACATGTTCACAAATATGGGAAGATACCTTCTACCACTTGCGGAGGATAAAAATCTGATCCCAAGTCTTGTGTCTTTTGTCGAGCAGGGTAGTGAAGTTTTAAAAGGAAAGGCACTTGTCCTTGTGGCTCTCCTCTGTAAGCATGGTAGGAGGTGGCTTTCACTCTTCTTTTGTAGCCAAAAGTTACTCTCTGTGGTGGATAGGCTGGGAAAGGAGAAGGATGCCTATGTACATCAGTGCTTAGATGCATTTGTGCATGTTGTGGCATCTACTATTCCAGGTTTACTAGATACAATAACAGGTGATATCCAGCAAATGATGGGAGGAAGGCGCCAAGGGCATGTCTCTGCCCTTACCAGCAGATCTGCTCCAAAAACCAACATTCATGTGTTTCCTGTTGTCCTTCATCTTATTGGGAGTTCAATTTTGAAACACAAAGTTGTTACACCTCATGTCCTGCAACAGTTAGCCAGTCTAATCAAACTAACAGAGACACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGCGTTTTGGAGTGTCTCACAGAGGAATCTCTTGTGGTCCTTGGAAACCCTGACATTTTCATACGTGAAATCCTTCCTAGCTTGACAGTTCTCTATAAGGGTAATAAGGATGGTGATGCCAGATTTTTGTGCCTTAAAATTCTTTTCGATGTGATGATTATTGTTTTGAGTGAACCGGTTGAAGAAGAGCAGAGATTGAAAGACCTGAAATTCATATCAAATGCCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTATTCCTATCTTTGCACAAAAGCTTCTGGTCATGCTACTGGAGTTTAATTTTATTACAATTCAGGACATTTTACATATAAAGACAATTTCACAATGCTTTGAATTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGATCTGTCTAGCTCTGGCTTCTGCTCCTGGAATGGAATCCAAGATACTCTCTCAACTAAAAGTGGTTAGGAGGATTGGTAATTTTCTCGAGTTTGTATATGCAAAGGGTATGGAAGATTTGCTGGAACCAACTCTTGGGCTGTGTAAGGCTTTTCTAGCGCGTTCCGTTACATGTGCAAAAGGCTTCAATTACTCAACAGAACCAACTCTCCTATGTGACAATCCTTCTGAGATGAGTGGTGCTGTTGATCCCCAGCAATGCATAAGAGATATAGCAGATCTTGCAAGCAATGTTGGTGTCTTGCTAGAGTTGAGTGCCTCCATTGAAACCAATATTGTGGATATAGCTTCTGAATGTGTAGTTTTACTGCTCAAAGCAGCTCCTAGAGAAGCCACCACTGGTCTACTAACCAATTTACCCAAGGTCAGTGTAATCCTAGAGTCCTGGAGTAGAGGCACCCCTCACTTGTTGGTGCAGCGAATGCTACATGCTTTAGGGTATGCATGCAAACAGTACTTATTGCATGCTATGATATTATCAATATCCATACCAGAGATTTCAAGAATTGAAGTGATTGTTTCTGAACTCAAAAGTTCTGGTGTTCCTGGTTTAACCAAAGCTGCTACATTAGCAGCATTGGAATTGCAGCGGCTACCTCGCTGCATTTGA 4113 0.4155 MNQYHIYEAIGRGKYSTVYKGRKKQTIEYFAIKSVDKSQKNKVLQEVRILHSLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDTQLPEDSVHDLAFDLVKALQFLHSNGIIYCDLKPSNILLDENGRTKLCDFGLARKLRDISKTPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYTGKPPFLGREFTQLVKSILSDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWSTKLTMVPLPAQLAFDDMIELHAKPCLPERNGDKSSHNRTPPKYREKDVKGLMKKDESSILGSRGIETPTRATPNGHRTQAKVSGKTAEVKQKGPSKISKVVNLLRLSRIAKSNLQKENEKENYRRPLPNSSENDSEVKIENTDMELDFNENTEDDAPEETDGLEHTTSIPDEKMDNGDHKQGKIEETANNIHQLDTPSIVNTPVSHDPRSVDQESTPDYPDISAISPSVSPQVKKHRGKEEVGSGLDSESSRSSSNLSQVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKLPKEQLEAILNRIIAILNGNTSIGEKQNLVRYLELLSSNADAANILTNGPIMLILVKLLRQSKALALRVQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDKQEKVRRFSMAALGELLFYISTQNADCRDNNPLESPSKDNRTSVGWQVPNSLISFVSSMLRKGEDDLTQLYALRTVENVCSQGGTWVGRFSSQDVISNLCYIYRASGKQESMRLTAGSCLVRLVRFNPPSIQSVMEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMFTNMGRYLLPLAEDKNLIPSLVSFVEQGSEVLKGKALVLVALLCKHGRRWLSLFFCSQKLLSVVDRLGKEKDAYVHQCLDAFVHVVASTIPGLLDTITGDIQQMMGGRRQGHVSALTSRSAPKTNIHVFPVVLHLIGSSILKHKVVTPHVLQQLASLIKLTETPFQGRDDFQITLLRVLECLTEESLVVLGNPDIFIREILPSLTVLYKGNKDGDARFLCLKILFDVMIIVLSEPVEEEQRLKDLKFISNARFLPLYPTLIEDEDPIPIFAQKLLVMLLEFNFITIQDILHIKTISQCFEFLLGDLSNANVNNVKICLALASAPGMESKILSQLKVVRRIGNFLEFVYAKGMEDLLEPTLGLCKAFLARSVTCAKGFNYSTEPTLLCDNPSEMSGAVDPQQCIRDIADLASNVGVLLELSASIETNIVDIASECVVLLLKAAPREATTGLLTNLPKVSVILESWSRGTPHLLVQRMLHALGYACKQYLLHAMILSISIPEISRIEVIVSELKSSGVPGLTKAATLAALELQRLPRCI* 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0450 1370 SUPERFAMILY ARM repeat 569 919 IPR016024 -
Lan16g0450 1370 CDD STKc_ULK4 3 257 - -
Lan16g0450 1370 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Lan16g0450 1370 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan16g0450 1370 MobiDBLite consensus disorder prediction 283 352 - -
Lan16g0450 1370 MobiDBLite consensus disorder prediction 373 517 - -
Lan16g0450 1370 Gene3D - 554 914 IPR011989 -
Lan16g0450 1370 MobiDBLite consensus disorder prediction 419 444 - -
Lan16g0450 1370 Gene3D Transferase(Phosphotransferase) domain 1 1 297 - -
Lan16g0450 1370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Lan16g0450 1370 MobiDBLite consensus disorder prediction 404 418 - -
Lan16g0450 1370 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0450 1370 MobiDBLite consensus disorder prediction 320 343 - -
Lan16g0450 1370 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0450 1370 MobiDBLite consensus disorder prediction 445 488 - -
Lan16g0450 1370 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0450 1370 MobiDBLite consensus disorder prediction 283 318 - -
Lan16g0450 1370 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1367 IPR044591 GO:0000911|GO:0000914|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0450 Lan-Chr16 4443568 4449973 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0450 1 270 AGC Kinase Gene Family AT1G45160 33.654 2.85e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Lan16g0450 Pkinase 4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0450 K17545 - gmx:100817590 2348.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0366 4 5908452 5915072 Lan16g0450 16 4443568 4449973 LSH