Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0448 ATGAACCAGTACCACATCTACGAAGCCATTGGTCGCGGAAAATACTCGACCGTGTACAAAGGTAGAAAGAAGCAGACAATTGAATATTTCGCCATCAAAAGCGTCGATAAATCTCAGAAAAACAAGGTGCTTCAAGAAGTTAGGATTCTTCACTCTTTGGATCACCAAAATGTGCTCAAGTTCTATTCCTGGTATGAAACTTCTGCTCACCTATGGTTGGTGTTGGAGTATTGTGTTGGAGGAGATTTGCTTTCCATATTACGGCAGGACACTCAACTTCCAGAAGACTCAGTTCATGATCTTGCTTTTGACCTAGTCAAGGCTTTGCAGTTTTTACATTCAAATGGAATAATATATTGTGACCTGAAACCATCAAATATCCTACTGGATGAAAATGGACGTACTAAGCTATGTGATTTCGGTTTGGCTAGAAAGTTAAGAGATATATCAAAAACTCCATCTTCCTCGTTGCCTCAAGCAAAACGTGGAACACCGTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGACTTCTGGGCCTTAGGCTGTGTACTGTATGAATGTTATACTGGGAAGCCTCCCTTTTTGGGAAGAGAATTCACTCAGCTTGTAAAATCTATTCTTTCAGATCCAACTCCACCTCTCCCTGGTAATCCGAGTCGACCTTTTGTCAATTTAATTAATTCTTTGCTTGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCATTTTGGAGTACCAAATTGACTATGGTGCCTCTACCAGCTCAACTTGCATTTGATGATATGATAGAGCTACATGCTAAACCATGCTTACCAGAAAGGAATGGTGATAAATCTTCCCATAACAGGACCCCTCCCAAATATCGTGAAAAAGATGTAAAGGGGTTGATGAAGAAGGATGAAAGTTCCATTTTAGGTTCTAGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGCCACAGAACTCAGGCAAAGGTTTCTGGCAAAACAGCTGAAGTGAAGCAGAAAGGTCCTTCCAAAATTAGCAAGGTTGTGAATCTTTTGAGACTGTTACATAATTAA 1104 0.4103 MNQYHIYEAIGRGKYSTVYKGRKKQTIEYFAIKSVDKSQKNKVLQEVRILHSLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDTQLPEDSVHDLAFDLVKALQFLHSNGIIYCDLKPSNILLDENGRTKLCDFGLARKLRDISKTPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYTGKPPFLGREFTQLVKSILSDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWSTKLTMVPLPAQLAFDDMIELHAKPCLPERNGDKSSHNRTPPKYREKDVKGLMKKDESSILGSRGIETPTRATPNGHRTQAKVSGKTAEVKQKGPSKISKVVNLLRLLHN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0448 367 CDD STKc_ULK4 3 257 - -
Lan16g0448 367 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0448 367 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan16g0448 367 MobiDBLite consensus disorder prediction 283 352 - -
Lan16g0448 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Lan16g0448 367 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0448 367 SUPERFAMILY Protein kinase-like (PK-like) 1 269 IPR011009 -
Lan16g0448 367 MobiDBLite consensus disorder prediction 320 343 - -
Lan16g0448 367 Gene3D Transferase(Phosphotransferase) domain 1 1 304 - -
Lan16g0448 367 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 366 IPR044591 GO:0000911|GO:0000914|GO:0008017
Lan16g0448 367 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0448 367 MobiDBLite consensus disorder prediction 283 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0448 Lan-Chr16 4433663 4436215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0448 1 246 AGC Kinase Gene Family AT1G45160 35.145 4.25e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Lan16g0448 Pkinase 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0448 K17545 - lang:109329212 754.592