Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0437 ATGGGTTGTGTTCATGGCAAGTGTTGTGGCAACTACCCTACACAATCAGAGGGTGATTCTGAACATGGCACTCACCGTTCCCAAAGGAAGCACATACTCACTCTGAGAGAAGTTGAGCTCGTTCCTGTTCCTTCCCACAACTTCAGATTGGAATACTCAGTTCTCACTCAGAGGGGATACTACCCTGACTCACCTGATAAGGAAAACCAAGATAGTTTCTGCATTAGGACACAAATTCAAGGTAATCCAAATGTTCATTTCTTTGGTGTGTATGACGGGCATGGTCAATTTGGTAGCGAATGTTCAAATTTTGTTAAGGATAGGTTGGTAGAAACATTGTCACATGACCCTGCATTGTTGGAGGACCCTGTTAAAGCCTATACTTCGGCGTTCTTGACAACAAATTATGAATTGCATAATAGTGAGATTGATGATTCTATGAGTGGCACTACTGCTATTACGGTGCTTGTTGTTGGAGACACCCTGTATGTTGCTAATGTTGGCGATTCGAGAGCGGTGCTAGCTGTTAAGAATGGGAACCGCATTGTTGCTGAGGACTTGTCATCTGATCAAACACCATTTCGGAGAGATGAATGTGATCGGGTGAAACTTTGTGGGGCAAGTGTGTTGAGTGTTGATCAGGTGGAAGGTCTTAAGGATCCCAAAATTCAGACTTGGGGAGATGAAGAGAGCGAAGGTGGTGATCCTCCGAGGTTGTGGGTTCCAAATACGATGTATCCTGGAACTGCTTTTACAAGGAGTGTAGGGGATAATTTGGCTGAGACTATTGGTGTCATTGCTGTTCCAGAGGTCTCAACAGTTCAGCTTACACCGAATCATCTTTTCTTTGTTGTTGCAAGTGATGGCATATTTGAGTTCCTATCAAGTCAAACTGTTGTTGATATGGCAGTAAGCTTTTCAGATCCCCGCGATGCTTGTGCTGCCATTGCTGGAGAGGCTTATAAACTATGGTTGGAACATGAGAACCGGACAGATGATATAACGATTACCATTGTTCAGATCAAAGGCTTGTCTCATTCAGGTACCTTTCGAGTCGGATCAAGTGAGATAAATGTCAGTACTGTGACAAGGAGCAAGAGGGAGAAGGGAACTTCTGAGATATCTGTTTCCACTGGGTCAGATGTATGCCGTTTTGTGAGGAGCCGTTCCTGTGATTTCAAGTCCTATCAGCATGCAGGAGTTAGTTGCTTCTACGCAAAATGA 1224 0.4412 MGCVHGKCCGNYPTQSEGDSEHGTHRSQRKHILTLREVELVPVPSHNFRLEYSVLTQRGYYPDSPDKENQDSFCIRTQIQGNPNVHFFGVYDGHGQFGSECSNFVKDRLVETLSHDPALLEDPVKAYTSAFLTTNYELHNSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKNGNRIVAEDLSSDQTPFRRDECDRVKLCGASVLSVDQVEGLKDPKIQTWGDEESEGGDPPRLWVPNTMYPGTAFTRSVGDNLAETIGVIAVPEVSTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAVSFSDPRDACAAIAGEAYKLWLEHENRTDDITITIVQIKGLSHSGTFRVGSSEINVSTVTRSKREKGTSEISVSTGSDVCRFVRSRSCDFKSYQHAGVSCFYAK* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0437 407 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Lan16g0437 407 SMART PP2C_4 47 339 IPR001932 -
Lan16g0437 407 CDD PP2Cc 67 341 IPR001932 -
Lan16g0437 407 Gene3D - 43 343 IPR036457 -
Lan16g0437 407 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 17 377 - -
Lan16g0437 407 SUPERFAMILY PP2C-like 37 343 IPR036457 -
Lan16g0437 407 Pfam Protein phosphatase 2C 74 321 IPR001932 -
Lan16g0437 407 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
Lan16g0437 407 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 17 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0437 Lan-Chr16 4320353 4340136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0437 1 346 PP2C-type Phosphatase Gene Family AT3G06270 72.159 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0376 4 6011211 6015058 Lan16g0437 16 4320353 4340136 LSH