Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0422 ATGTCTCACATAGCTGTGGAGAGGAATAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCCTTGACCCCATGTTTCTATATTAAAAGAGGAGATCAAGCTTCTATCATTGGAGGAGTGATAGAATTCATCAAGGAGTTACACCAAGTTCATCAAGCTTTGGAGTCTCAGAAAAGAAGAAAGAGTCTAAGCCCTAGTCCCGGTCCGAGTCCAAAAACACTGCAATCAACAGTTATTCAACTTGATAACTCCTCCAGAATTGAGACTGATCAATCTTTTAAGGAGCTAGGAGCAAGTTGCAACTCTTCAACCGCTGATGTAGAGGTGAAAATTTCGGGTTCAAATGTGATTCTGAAAGTGATTTCACACAGAATTCCGGGTCAAGTTGCAAAGATTATAGGTGTTTTGGAAGGTCTTTCATTTGAAGTCCTTCATCTGAATATCAGTAGCATGGAGGATACTGTCCTATACCACTTTGTTGTTAAGATAGGGCTGGAATGTCAACTAAGTCTAGAGGAACTTGCCATGGAAGTACAACAAAGTTTCAGCTCTGAAGCAATTACTGTGCTGTGA 579 0.4007 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVHQALESQKRRKSLSPSPGPSPKTLQSTVIQLDNSSRIETDQSFKELGASCNSSTADVEVKISGSNVILKVISHRIPGQVAKIIGVLEGLSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAMEVQQSFSSEAITVL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0422 192 MobiDBLite consensus disorder prediction 57 77 - -
Lan16g0422 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Lan16g0422 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Lan16g0422 192 PANTHER TRANSCRIPTION FACTOR MUTE 1 190 - -
Lan16g0422 192 MobiDBLite consensus disorder prediction 61 77 - -
Lan16g0422 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Lan16g0422 192 SMART finulus 4 55 IPR011598 GO:0046983
Lan16g0422 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 190 IPR044283 GO:0003700|GO:0010052
Lan16g0422 192 Gene3D - 1 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0422 Lan-Chr16 4122002 4123887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0422 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 68.000 7.97e-89 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan16g0422 HLH 4.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0422 - - gmx:100810771 306.219