Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan16g0403 | ATGAGTTGTTGCTTACCATGCTGCAAATCTGAAGTTGAATCACCCTCTTACACAAAAGTAGAAAGAAAAACCAGAAAAGTTTCAGCAGGAAGGCAAACATTCAAATCAATAGCTGCTGCTGTGTCAATTAAGACCGGTAGCAGCAGGCATAGACATATAACAGCAGAGATACTAAAATATGGAGCTGCACAAAATGATGTAAAAGTATTCACATATGAAGAACTTGCTGCTGCAACAGGCAACTTTAGCACTGATTGCCGTATCGGAGAAGGTGGATTTGGGAATGTCTACAAAGGATACATAAAAAGCACTAATCAAACTGTAGCTGTGAAGCAACTGAATAGAGAAGGAACCCAAGGAACAAGAGAATTTTTCGCCGAGGTTTTGATGTTAAGCTTGGTGAAACATCCTAACCTTGTCAAGCTCCTTGGTTATTGTGCAGAAGAAGATAATAGAATTCTAGTTTATGAATGCATGGCTAATGGAAGTTTGGAAGATCACCTTCTAGACATGGGTAAAGATAAGGAGCCATTGGATTGGCAGACAAGGATGAAAATAGCTGAGGGAGCAGTTAGAGGACTTGAATACTTGCATAATGGTGCAGATCCACCAGTGATATTCCGTGATTTCAAATCGTCTAATATACTGTTAGATGAAAATTTCAATGCAAAGCTATCAGATTTTGGACTTGCTAAGTTGGGTCCAATTGAAGGCAAGAATCCTGTCTCAACTAGGGTGATGGGAACCTATGGCTATTGTGCACCTGAGTATGCTTCTTCAGGTCAACTATCCACAAAAATAGATATATATAGTTTTGGTGTAGTGCTTTTGGAGATAATCACTGGTAGGAGGGTAATAGACACAGCAAGATGTGCAGAGGAGCAAAACTTGATTGATTGGGCAACACCATTGTTTAAGGACAGAAAGAAGTTCACTCAAATGGCTGATCCTTTGCTAGAAGGTAATTTCCCAGTGAAGGGTCTATTTCAAGCTCTAGCAGTGGCAGCAATGTGCCTACAAGAGGAACCGGATATGCGGCCTCAAGTGGATGATGTTGTAACAGCTCTTATGCATCTAACAACACAAAAAAATGAAGAAAAAGACATTGTTAGTGATTCTCTGAAAAGTGAAGGACATGTTGAGTCTTTTAGAGCTACACCTTCATTTGAAGAGCCAATGGATTAG | 1185 | 0.3992 | MSCCLPCCKSEVESPSYTKVERKTRKVSAGRQTFKSIAAAVSIKTGSSRHRHITAEILKYGAAQNDVKVFTYEELAAATGNFSTDCRIGEGGFGNVYKGYIKSTNQTVAVKQLNREGTQGTREFFAEVLMLSLVKHPNLVKLLGYCAEEDNRILVYECMANGSLEDHLLDMGKDKEPLDWQTRMKIAEGAVRGLEYLHNGADPPVIFRDFKSSNILLDENFNAKLSDFGLAKLGPIEGKNPVSTRVMGTYGYCAPEYASSGQLSTKIDIYSFGVVLLEIITGRRVIDTARCAEEQNLIDWATPLFKDRKKFTQMADPLLEGNFPVKGLFQALAVAAMCLQEEPDMRPQVDDVVTALMHLTTQKNEEKDIVSDSLKSEGHVESFRATPSFEEPMD* | 395 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan16g0403 | 394 | Gene3D | Phosphorylase Kinase; domain 1 | 66 | 158 | - | - | |
Lan16g0403 | 394 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 355 | IPR011009 | - | |
Lan16g0403 | 394 | ProSitePatterns | Protein kinases ATP-binding region signature. | 88 | 111 | IPR017441 | GO:0005524 | |
Lan16g0403 | 394 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 381 | - | - | |
Lan16g0403 | 394 | Pfam | Protein kinase domain | 85 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan16g0403 | 394 | PANTHER | RECEPTOR SERINE/THREONINE KINASE | 3 | 388 | - | - | |
Lan16g0403 | 394 | PANTHER | OS07G0668900 PROTEIN | 3 | 388 | - | - | |
Lan16g0403 | 394 | CDD | STKc_IRAK | 88 | 359 | - | - | |
Lan16g0403 | 394 | MobiDBLite | consensus disorder prediction | 367 | 394 | - | - | |
Lan16g0403 | 394 | ProSiteProfiles | Protein kinase domain profile. | 82 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan16g0403 | Lan-Chr16 | 3913303 | 3916502 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan16g0403 | 68 | 361 | Glycoside Hydrolase | AT3G07070 | 65.306 | 2.02e-140 | 404 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Lan16g0403 | Pkinase | 7.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan16g0403 | - | - | gmx:100305361 | 585.489 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan4g0400 | 4 | 6214358 | 6217336 | Lan16g0403 | 16 | 3913303 | 3916502 | LSH |