Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0387 ATGGCACATCCTTTGCCAATTATTCACAAGGTGGGAGTTCCTCCTAAGCAGACACTTTTCCAAGAGTTTGAACATAATGTGAAGGAAATATTCTTCTCAGACAACCCTTTAACCAAATTTAAGAACCAAAGTGGATCCAGAAAATTTGTTCTAGGTTTGCATTCAGTTTTCCCTATTTTTGATTGGGGAAGAGGTTACAACCTTACAACATTCAGATATGATTTCATTGCTGGAATTACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAGGCTTGCAAATTTGGATCCCCAATATGGACTATACACCAGCTTTGTGACACCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCTGTATCTGTGGTATCCCTCTTGCTTGGGACTATGCTTACTGAAGAGATTAGTGACTACAAAAGCCATGAATATCTGAGGCTTGCATTCACTGCCACCTTCTTTGCAGGAGTTACTCAAATGACACTAGGAGTTTTAAGGCTTGGTTTCTTGATTGAATTCATATCTCATGCTGCTATTGTGGGATTCATGGCTGGAGCAGCCATTACTATTGCACTGCACCAGCTTCAAGGCTTGCTTGGCATACAAGGCTTCACTAAGAAAAATGATGTAGTTTCTGTCATGCGCTCGGTTTGGAGTACAATGCACCATGGGTGGAACTGGCACACAATTGTGATTGGAGTAGCATTCCTGGTCTTCCTTCTTGTAACCAAGTTCATTGCTAAAAAGAAAAAGAAACTCTTTTGGTTGGCTGCAATTGCTCCTATGGTCTCTGTCATAGTATCTACAGTTTTTGTGTACATTACAAGGGTAGACAAGAAAGGTGTATCAATTGTGAGACACATTGAGAAAGGTGTGAATCCAATATCTGCTGGTGAAATTTTTTTCAGTGGCAAATATCTTGGCCCGGGTATTCGGATTGGTATGGTAGCTGGTATGGTAGCACTCACCGAAGCTGTTGCTATTGGGAGAACATTTGCTGCCATAAAAGACTATTCATTGGATGGTAACAAAGAAATGTTGGCTATGGGAACAATGAATATCATTGGTTCACTCACATCCTGTTATGTAGCTACAGGATCATTTTCTCGCACAGCAGCGAACTTTATGGCTGGTTGTAAAACTGCTGTATCAAACATTGTTATGTCCACTACAGTGTTGTTGACTCTGATACTCATTACACCACTATTCAAGTACACTCCAAATGCTGTGCTTTCTTCTATTATAATAGTTGTGGTGCTAGGCCTTGTGAACATCGATGTTGTTTTTCTGCTATGGAAGATCGATAAATTCGACTTCGTTGCTTTCATGGGAGCCTTCTTTGGTGTAATCTTCAAAAGTGCTGACATTGGCATTCTAATTGCAGTGGTATTATCTTTTGCTAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGTGGTACTTGGGATGATAGCAGGAACTGGTGTTTACAGGAACATCCAGCAATACCCCAACGCAACCCAGATTCCAGGCATGCTAATTATCAGGGTCGACTCTGCAATCTACTTCTCAAACTCGAACTATATTAAGGAGAGAATTTTGAGATGTTTGGCTGATGAAGATGCCGAAAGGACAGGAAGTGAATTACCAAGAATACAGTATCTCATTGTTGAAATGTCACCTGTTAGTGATATTGACACTAGTGGCATTCATGCATTTCAACAATTATATAAAAGCCTTCAGAAAAGAGAAGTACAGCTTGTGTTGTCAAACCCGGGGCCAATTGTAATGGAGAAGCTCCATGCATCAAAGTTAACTGACTTAATTGGTGAAGATAAAATATTTTTATCAGTGGCTGAAGCTGTTGCAACTTTTGGTCCAAAGGGTGAAGATTTGTAA 1899 0.4028 MAHPLPIIHKVGVPPKQTLFQEFEHNVKEIFFSDNPLTKFKNQSGSRKFVLGLHSVFPIFDWGRGYNLTTFRYDFIAGITIASLCIPQDIAYARLANLDPQYGLYTSFVTPLVYAFMGSSRDIAIGPVSVVSLLLGTMLTEEISDYKSHEYLRLAFTATFFAGVTQMTLGVLRLGFLIEFISHAAIVGFMAGAAITIALHQLQGLLGIQGFTKKNDVVSVMRSVWSTMHHGWNWHTIVIGVAFLVFLLVTKFIAKKKKKLFWLAAIAPMVSVIVSTVFVYITRVDKKGVSIVRHIEKGVNPISAGEIFFSGKYLGPGIRIGMVAGMVALTEAVAIGRTFAAIKDYSLDGNKEMLAMGTMNIIGSLTSCYVATGSFSRTAANFMAGCKTAVSNIVMSTTVLLTLILITPLFKYTPNAVLSSIIIVVVLGLVNIDVVFLLWKIDKFDFVAFMGAFFGVIFKSADIGILIAVVLSFAKILLQVTRPRTVVLGMIAGTGVYRNIQQYPNATQIPGMLIIRVDSAIYFSNSNYIKERILRCLADEDAERTGSELPRIQYLIVEMSPVSDIDTSGIHAFQQLYKSLQKREVQLVLSNPGPIVMEKLHASKLTDLIGEDKIFLSVAEAVATFGPKGEDL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0387 632 PANTHER SULFATE TRANSPORTER 4 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan16g0387 632 Pfam Sulfate permease family 71 450 IPR011547 GO:0016021
Lan16g0387 632 Pfam STAS domain 503 621 IPR002645 -
Lan16g0387 632 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 4 631 - -
Lan16g0387 632 SUPERFAMILY SpoIIaa-like 504 626 IPR036513 -
Lan16g0387 632 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Lan16g0387 632 Gene3D STAS domain 482 626 IPR036513 -
Lan16g0387 632 CDD STAS_SulP_like_sulfate_transporter 503 618 - -
Lan16g0387 632 ProSiteProfiles STAS domain profile. 502 625 IPR002645 -
Lan16g0387 632 TIGRFAM sulP: sulfate permease 58 621 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0387 Lan-Chr16 3783207 3788468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0387 6 631 Inorganic Solute Cotransporters AT1G22150 69.219 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0387 K17470 - gmx:100784124 988.023