Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0385 ATGAATGCTGAAACTAAGAACTCTCTCAAAGTGAAACAAACTCAAACCATGTCTTCCTCTTCTTCTTCTCTTTCTCCTTTGGGCAGTGTTGTTAACAACATCAACCCTTCAAAATCATCTGAAGTGAGAGGCAGAAAAAGGCGTATTGGTTCTCAAAAACAGCTTCCAGAGTTAAAAACTCCAATGGTTAGGGTTTATAATCGATCAAAGTTGCCTCGTGTTCGTTGGACCCCAGAACTACACCGTTGTTTCGTTCATGCAGTTCAAAATCTTGGAGGAGAAGACAGGGCCACACCAAAGATGATTTTGCAGCTAATGAATGTGAACTGGCTTACTATATCTCACATTAAAAGCCACCTTCAGATGTACAGGAATATGAAGCAAGAGCAGCAGATGAGTCAAGCAAAGAAGAATTTTATGACACCACATTTCGTTCCAAGATCAACCCTTGAATCAAATTATAGCCATCAGAATATTCACCAATGGAGCCGTGGAACTGATCATTATGCAGAAGAGCTTGCTCTCATCCAAGCTCAAGGGAATCATCATGAGCTGAAATGTTACTATGGAAATAAAGGAACTGAGTCAATGGTTATTTGTAAAGGAGATGAACAGAAGAAGCACACCTACATTGTCTTCAAGGATCTTCTTGGAAGCCAGAGTGTCCAAGAGACTAAAAATCCTCCTGGAATGGAGTCACTAGGGGCTGCAGCTGCTTACAAAAGCTACCATCAAAGATTGGGAGAGCAAAAAGATGAAGATATGCTGTCCCTATCATTAGGTTCAAGACAAGGCTTGAATGATCAAGAGCCAAGGCCAGATGCAAATGATGTCTCTCTTGAGCTTAAACTTAAGCTCAATTAA 864 0.4074 MNAETKNSLKVKQTQTMSSSSSSLSPLGSVVNNINPSKSSEVRGRKRRIGSQKQLPELKTPMVRVYNRSKLPRVRWTPELHRCFVHAVQNLGGEDRATPKMILQLMNVNWLTISHIKSHLQMYRNMKQEQQMSQAKKNFMTPHFVPRSTLESNYSHQNIHQWSRGTDHYAEELALIQAQGNHHELKCYYGNKGTESMVICKGDEQKKHTYIVFKDLLGSQSVQETKNPPGMESLGAAAAYKSYHQRLGEQKDEDMLSLSLGSRQGLNDQEPRPDANDVSLELKLKLN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0385 287 MobiDBLite consensus disorder prediction 1 56 - -
Lan16g0385 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 220 IPR044848 GO:0003700
Lan16g0385 287 MobiDBLite consensus disorder prediction 251 279 - -
Lan16g0385 287 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 126 IPR006447 GO:0003677
Lan16g0385 287 Pfam Myb-like DNA-binding domain 73 124 IPR001005 -
Lan16g0385 287 Gene3D - 71 128 - -
Lan16g0385 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
Lan16g0385 287 SUPERFAMILY Homeodomain-like 71 127 IPR009057 -
Lan16g0385 287 MobiDBLite consensus disorder prediction 1 39 - -
Lan16g0385 287 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 25 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0385 Lan-Chr16 3766981 3771543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0385 63 141 G2-like Transcription Factor Family AT2G42660 56.962 2.98e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan16g0385 Myb_DNA-binding 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0385 - - lang:109334099 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0684 19 12895755 12901634 Lan16g0385 16 3766981 3771543 LSH