Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0370 ATGGGAAAATCTGGGGGTAGAAGAAAAAAGGGTAGTGCTTCAAAATCAAACCAAGCTTCTGTTGATGATTCAGTTGCTCCAATTGCTAATGGTAGTGTGGATTTGGATTCCTCAATATTTTTGAAGAGAGCCCATGAGCTCAAAGAAGTGGGAAATGTAAAGTTCCAGAATAAGGACTTTGTTGGTGCCCTACAACATTATGAGAATGCCCTAAAACTAACCCCTAAGACCCACCCTGATAGGGCTGTTTTCCACAGCAACAGAGCTGCTTGTTTGATGCAAATGAAACCTACTGATTATGAATCTGTGATTGCCGAGTGCACCATGGCGCTTCAGGTTCAGCCGCAATTTGCTAGGGCACTCATTCGGAGGGCTCGGGCATTTGAGGCTGTAGGGAAGTATGAGATGGCTATGCTTGATGTGCAAGTGCTATTGGGAGTTGAACCTAATCACGGGGATGCTTTAGAGATTGCTAGGAGATTGAGGACTGCGTTGGGAACTCGCCAGGAAGCTCAGCAGGACCTTCATAGTCGCCCTTCCCCTGCTGCCCTTGGTGCTTCTGCGGTTCGTGGTGCTCCAATTGCTGGTTTAGGGCCATCTTTACCTGCCCGACCAGGGCCTAAGAAGGGGGCAAGTGCAGCTACTGGATTGCTTGTGTCACCTAATTACAAGCCAGAGAAGCCCCAAGTTATTTTATCATCTGAAAATGGTCATGAGAACAAGTCACAGTCTCCAAAACTTTCGTTGAAACCCTCAAGTGGCTCCGCTAATACCTCTAATCCAAGGAAGGGAAACCAGAAGGATCTGTTGTCTCATTCAGCAAATGTTCAGCACTCAGAGGTTGTAATTCGGTTGAGACCTTTGAAACTTGTTTATGATCATGATATCAGGCTTGCTGAGATGCCAGTGAATTGCAGTTTTAGAGTGCTGCGAGAATTAGTGACCAAGAGATTTCCATCATCAAAGTCTGTTCTGATCAAGTATAAGGATAATGACGGTGATTTGGTGACTATAACATCTACGGATGAACTCAGATTGGCCGAAGGTAGTGTGGATAGCCATCTCCTGAAAGAACCCGAAGCAGATAAAAGTGATTCAGTTGGGATGCTGAGACTAAATATCGTTGAAGTTAGTCCTGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCTGTGGAGAGCGATGGGATCAAGGAAGTTGAGAGTGAGTCTCAATCACCCAATGAATCTTTCTCTGAGGCCCCTGACACTGAAGCTGATAAGATAGAGAAAGATGCACCGAAGGAAAAGCCTGGTTCTGCCACAGAAGCTACTGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCTCATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGTTTTGTTCTGAGGCACTCGAGGAAACAGTCACCGGTGAGGAGGCCCAGGATCTCTTTGACAAAGCGGCTTTGAAGTTCCAGGAGGTGGCTGCTTTGGCATTCTTCAATTGGGGAAATGTTTACATGTGTGCTGCTAGGAAGCGAATCCCCTTAGATGAGTCAGCTGGTGAAGAAGTAGTGGCAGAACGGCTTCAAGTTGCATATGACTGGGTCAAGGAAAAATATACATTGGCAAGGGAGAAGTATGAGCAAGCACTCGTGATTAAACCAGACTTCTATGAAGGGTTACTGGCTCTGGGTCAGCAACAATTTGAAATGGCTAAGCTTCATTGGTCTTTTGCACTTGCTAAGAAAATTGATCTATCAAGCTGGGACCCTACAGAGACAATTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCAACTGATATGTGGGAGAAGCTGGAGGAGCAGAGAGCAAAGGAGCTACAAGACCCGAATGCAAGCAAGAAAGAAGAACTATTGAGAAGAAGAAAAAAACAGGGAGGTTCCGCCGAAGGTGAGTCCTCTGCTGTTGGTCAGGGTGATATATCTGCAAAGGAAGCTGCAGAGCAAGCAGCCGTCATGAGATCGCAGATCCACCTTTTCTGGGGCAATATGCTATTTGAAAAATCCCAAGTTGAATGTAAATTAGGAAGGGGTGATTGGAATAAAAATCTGGATGCTGCTATCGAGCGCTTTAAGCTTGCAGGAGCATCCGAGGCTGATATTTCAATGGTGCTAAAGAATCATTACTCCAATGGAGATGCAAAGGAAGGAGAAGTAAAAGGACCTGAAAGTCACAACTCGACTGCACTGCCAAAATAG 2286 0.4554 MGKSGGRRKKGSASKSNQASVDDSVAPIANGSVDLDSSIFLKRAHELKEVGNVKFQNKDFVGALQHYENALKLTPKTHPDRAVFHSNRAACLMQMKPTDYESVIAECTMALQVQPQFARALIRRARAFEAVGKYEMAMLDVQVLLGVEPNHGDALEIARRLRTALGTRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPSLPARPGPKKGASAATGLLVSPNYKPEKPQVILSSENGHENKSQSPKLSLKPSSGSANTSNPRKGNQKDLLSHSANVQHSEVVIRLRPLKLVYDHDIRLAEMPVNCSFRVLRELVTKRFPSSKSVLIKYKDNDGDLVTITSTDELRLAEGSVDSHLLKEPEADKSDSVGMLRLNIVEVSPEQEPPLLEEEEEKPVESDGIKEVESESQSPNESFSEAPDTEADKIEKDAPKEKPGSATEATECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMEFCSEALEETVTGEEAQDLFDKAALKFQEVAALAFFNWGNVYMCAARKRIPLDESAGEEVVAERLQVAYDWVKEKYTLAREKYEQALVIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSSWDPTETIQLFDSAEEKMKAATDMWEKLEEQRAKELQDPNASKKEELLRRRKKQGGSAEGESSAVGQGDISAKEAAEQAAVMRSQIHLFWGNMLFEKSQVECKLGRGDWNKNLDAAIERFKLAGASEADISMVLKNHYSNGDAKEGEVKGPESHNSTALPK* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0370 761 MobiDBLite consensus disorder prediction 630 670 - -
Lan16g0370 761 MobiDBLite consensus disorder prediction 378 441 - -
Lan16g0370 761 MobiDBLite consensus disorder prediction 235 267 - -
Lan16g0370 761 MobiDBLite consensus disorder prediction 740 761 - -
Lan16g0370 761 Gene3D Tetratricopeptide repeat domain 453 657 IPR011990 GO:0005515
Lan16g0370 761 ProSiteProfiles PB1 domain profile. 285 377 IPR000270 GO:0005515
Lan16g0370 761 SMART PB1_new 285 377 IPR000270 GO:0005515
Lan16g0370 761 PANTHER - 1 756 - -
Lan16g0370 761 SMART tpr_5 118 151 IPR019734 GO:0005515
Lan16g0370 761 SMART tpr_5 44 77 IPR019734 GO:0005515
Lan16g0370 761 SMART tpr_5 82 117 IPR019734 GO:0005515
Lan16g0370 761 SUPERFAMILY TPR-like 491 587 IPR011990 GO:0005515
Lan16g0370 761 MobiDBLite consensus disorder prediction 416 441 - -
Lan16g0370 761 SUPERFAMILY TPR-like 41 175 IPR011990 GO:0005515
Lan16g0370 761 MobiDBLite consensus disorder prediction 1 23 - -
Lan16g0370 761 MobiDBLite consensus disorder prediction 630 657 - -
Lan16g0370 761 PANTHER PROTEIN CLMP1 1 756 IPR044517 -
Lan16g0370 761 CDD PB1 288 347 - -
Lan16g0370 761 Gene3D - 287 357 - -
Lan16g0370 761 ProSiteProfiles TPR repeat profile. 44 77 IPR019734 GO:0005515
Lan16g0370 761 Coils Coil 611 631 - -
Lan16g0370 761 SUPERFAMILY CAD & PB1 domains 282 349 - -
Lan16g0370 761 MobiDBLite consensus disorder prediction 196 222 - -
Lan16g0370 761 Pfam PB1 domain 287 375 IPR000270 GO:0005515
Lan16g0370 761 Gene3D Tetratricopeptide repeat domain 41 176 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0370 Lan-Chr16 3564165 3566907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0370 32 165 Calmodulin-binding Proteins AT3G25230 26.207 3.18e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0370 - - gmx:100786963 1087.79