Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0366 ATGGGAAAATCTGGGGGTAGAAGAAAAAAGGGTAGTGCTTCAAAATCAAACCAAGCTTCTGTTGATGATTCAGTTGCTCCAATTGCTAATGGTAGTGTGGATTTGGATTCCTCAATATTTTTGAAGAGAGCCCATGAGCTCAAAGAAGTGGGAAATGTAAAGTTCCAGAATAAGGACTTTGTTGGTGCCCTACAACATTATGAGAATGCCCTAAAACTAACCCCTAAGACCCACCCTGATAGGGCTGTTTTCCACAGCAACAGAGCTGCTTGTTTGATGCAAATGAAACCTACTGATTATGAATCTGTGATTGCCGAGTGCACCATGGCGCTTCAGGTTCAGCCGCAATTTGCTAGGGCACTCATTCGGAGGGCTCGGGCATTTGAGGCTGTAGGGAAGTATGAGATGGCTATGCTTGATGTGCAAGTGCTATTGGGAGTTGAACCTAATCACGGGGATGCTTTAGAGATTGCTAGGAGATTGAGGACTGCGTTGGGAACTCGCCAGGAAGCTCAGCAGGACCTTCATAGTCGCCCTTCCCCTGCTGCCCTTGGTGCTTCTGCGGTTCGTGGTGCTCCAATTGCTGGTTTAGGGCCATCTTTACCTGCCCGACCAGGGCCTAAGAAGGGGGCAAGTGCAGCTACTGGATTGCTTGTGTCACCTAATTACAAGCCAGAGAAGCCCCAAGTTATTTTATCATCTGAAAATGGTCATGAGAACAAGTCACAGTCTCCAAAACTTTCGTTGAAACCCTCAAGTGGCTCCGCTAATACCTCTAATCCAAGGAAGGGAAACCAGAAGGATCTGTTGTCTCATTCAGCAAATGTTCAGCACTCAGAGGTTGTAATTCGGTTGAGACCTTTGAAACTTGTTTATGATCATGATATCAGGCTTGCTGAGATGCCAGTGAATTGCAGTTTTAGAGTGCTGCGAGAATTAGTGACCAAGAGATTTCCATCATCAAAGTCTGTTCTGATCAAGTATAAGGATAATGACGGTGATTTGGTGACTATAACATCTACGGATGAACTCAGATTGGCCGAAGGTAGTGTGGATAGCCATCTCCTGAAAGAACCCGAAGCAGATAAAAGTGATTCAGTTGGGATGCTGAGACTAAATATCGTTGAAGTTAGTCCTGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCTGTGGAGAGCGATGGGATCAAGGAAGTTGAGAGTGAGTCTCAATCACCCAATGAATCTTTCTCTGAGGCCCCTGACACTGAAGCTGATAAGATAGAGAAAGATGCACCGAAGGAAAAGCCTGGTTCTGCCACAGAAGCTACTGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCTCATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGTTTTGTTCTGAGGCACTCGAGGAAACAGTCACCGGTGAGGAGGCCCAGGATCTCTTTGACAAAGCGGCTTTGAAGAGGTTTCAAACCCTAACGATATCACTTCTCAAAACCCAACGTTATTCCTTAACTGAACCTTCACCATTTCTCCCCCATCTTCTACAATTCTCCATTGGGCAATCGCAGGCACAAAGAAAGTTTCATTTTTTCGCAGAAATTCCTTATCTTTCAGCTTCTTACCTGTAA 1677 0.4532 MGKSGGRRKKGSASKSNQASVDDSVAPIANGSVDLDSSIFLKRAHELKEVGNVKFQNKDFVGALQHYENALKLTPKTHPDRAVFHSNRAACLMQMKPTDYESVIAECTMALQVQPQFARALIRRARAFEAVGKYEMAMLDVQVLLGVEPNHGDALEIARRLRTALGTRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPSLPARPGPKKGASAATGLLVSPNYKPEKPQVILSSENGHENKSQSPKLSLKPSSGSANTSNPRKGNQKDLLSHSANVQHSEVVIRLRPLKLVYDHDIRLAEMPVNCSFRVLRELVTKRFPSSKSVLIKYKDNDGDLVTITSTDELRLAEGSVDSHLLKEPEADKSDSVGMLRLNIVEVSPEQEPPLLEEEEEKPVESDGIKEVESESQSPNESFSEAPDTEADKIEKDAPKEKPGSATEATECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMEFCSEALEETVTGEEAQDLFDKAALKRFQTLTISLLKTQRYSLTEPSPFLPHLLQFSIGQSQAQRKFHFFAEIPYLSASYL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0366 558 MobiDBLite consensus disorder prediction 378 441 - -
Lan16g0366 558 MobiDBLite consensus disorder prediction 235 267 - -
Lan16g0366 558 Gene3D - 287 357 - -
Lan16g0366 558 ProSiteProfiles PB1 domain profile. 285 377 IPR000270 GO:0005515
Lan16g0366 558 SMART PB1_new 285 377 IPR000270 GO:0005515
Lan16g0366 558 SMART tpr_5 82 117 IPR019734 GO:0005515
Lan16g0366 558 SMART tpr_5 118 151 IPR019734 GO:0005515
Lan16g0366 558 SMART tpr_5 44 77 IPR019734 GO:0005515
Lan16g0366 558 PANTHER - 1 507 - -
Lan16g0366 558 MobiDBLite consensus disorder prediction 416 441 - -
Lan16g0366 558 MobiDBLite consensus disorder prediction 1 23 - -
Lan16g0366 558 Pfam PB1 domain 287 375 IPR000270 GO:0005515
Lan16g0366 558 CDD PB1 288 347 - -
Lan16g0366 558 Gene3D Tetratricopeptide repeat domain 41 176 IPR011990 GO:0005515
Lan16g0366 558 SUPERFAMILY CAD & PB1 domains 282 349 - -
Lan16g0366 558 ProSiteProfiles TPR repeat profile. 44 77 IPR019734 GO:0005515
Lan16g0366 558 PANTHER PROTEIN CLMP1 1 507 IPR044517 -
Lan16g0366 558 SUPERFAMILY TPR-like 41 175 IPR011990 GO:0005515
Lan16g0366 558 MobiDBLite consensus disorder prediction 196 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0366 Lan-Chr16 3538045 3564317 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0366 32 165 Calmodulin-binding Proteins AT3G25230 26.207 6.80e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0366 - - lang:109329206 1047.34