Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0365 ATGGCAAGCTCATGTTTCCACGGGCTTCGTCTGAGGAGGTCAAAGAGTAATAAACCTTCACCAGCACCTTCTTCTTCCTACAAAGCCAAGTTGAAATGTGAAATGGAGAACAATAACATGGAAAGAAAGAGGTTTGATAGCATGGAATCATGGTCCATGATATTAGAGTCTGAGAATGTAGAGACATGGGAAGTTCCAAAGGAGGACCAAGAGGAATGGACTGCAGACCTTTCACAACTTTTCATAGGTAACAAGTTTGCTTCTGGAGCTCACAGTAGGATATACCGTGGAATCTACAAGCAGAGAGCAGTGGCTGTGAAAATGGTGAGGATTCCAACACAGGATGAGGAGAGAAGAGTCCTATTAGAACAGCAATTTAAGTCTGAAGTTTCTTTGCTGTCATGTCTCTTTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCACCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACACTGAGGATGTATCTGAACAAGAAAGAGCCATACTCTCTTGCAATAGACACAATACTAAGGTTAGCTCTTGACATATCTAGGGGTATGGAGTACCTTCATTCGCGAGGCGTGATTCACAGAGACCTCAAGTCTAATAACTTGCTTCTCAATGATGAGATGAGGGTTAAGGTTGCAGATTTTGGTACATCATGCCTTGAAACTCGATGTCGCGAGACGAAAGGAAACATGGGAACATATCGTTGGATGGCGCCGGAGATGATCAAGGAAAAGCCTTATACTAGGAAGGTTGATGTCTATAGTTTTGGTATTGTTCTTTGGGAGCTCACAACATGTTTACTTCCATTCCAAGGAATGACTCCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAACGAAAGGCCTCCTCTGGCAGCTAGTTGTCAACCAGCACTTGCTCATTTGATAAAACGTTGTTGGTCAGCAAACCCTTCAAAGAGACCAGATTTCTGTGACATTGTGTCTACTCTTGAGAAGTACGATGAATGTGTCAAAGAGGGTTTACCTCTAACTCATCATTCTGGCTTAGTCAGTGGTAATGTCATTATTCAACGCCTAAAAGGTTGTGTCTCTATGAGTTCTTCCATACTTGTACATGCCTAA 1134 0.4224 MASSCFHGLRLRRSKSNKPSPAPSSSYKAKLKCEMENNNMERKRFDSMESWSMILESENVETWEVPKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRVLLEQQFKSEVSLLSCLFHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLAIDTILRLALDISRGMEYLHSRGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTCLLPFQGMTPVQAAFAVAEKNERPPLAASCQPALAHLIKRCWSANPSKRPDFCDIVSTLEKYDECVKEGLPLTHHSGLVSGNVIIQRLKGCVSMSSSILVHA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0365 377 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 365 - -
Lan16g0365 377 ProSiteProfiles Protein kinase domain profile. 80 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0365 377 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
Lan16g0365 377 Pfam Protein tyrosine and serine/threonine kinase 82 334 IPR001245 GO:0004672|GO:0006468
Lan16g0365 377 MobiDBLite consensus disorder prediction 1 28 - -
Lan16g0365 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lan16g0365 377 SUPERFAMILY Protein kinase-like (PK-like) 52 334 IPR011009 -
Lan16g0365 377 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 11 365 - -
Lan16g0365 377 CDD STKc_MAP3K-like 87 334 - -
Lan16g0365 377 SMART serkin_6 80 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0365 377 Gene3D Transferase(Phosphotransferase) domain 1 163 347 - -
Lan16g0365 377 PRINTS Tyrosine kinase catalytic domain signature 158 171 IPR001245 GO:0004672|GO:0006468
Lan16g0365 377 PRINTS Tyrosine kinase catalytic domain signature 196 214 IPR001245 GO:0004672|GO:0006468
Lan16g0365 377 PRINTS Tyrosine kinase catalytic domain signature 242 252 IPR001245 GO:0004672|GO:0006468
Lan16g0365 377 PRINTS Tyrosine kinase catalytic domain signature 261 283 IPR001245 GO:0004672|GO:0006468
Lan16g0365 377 PRINTS Tyrosine kinase catalytic domain signature 305 327 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0365 Lan-Chr16 3531320 3536372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0365 1 368 MAP Kinase Kinase Kinase AT1G62400 80.902 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan16g0365 PK_Tyr_Ser-Thr 4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0365 - - gmx:100799437 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0439 4 6557046 6559805 Lan16g0365 16 3531320 3536372 LSH
Lan12g1335 12 18935851 18938729 Lan16g0365 16 3531320 3536372 PCT