Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0339 ATGAGTTCAATACCTTCAAAAAACTTATGGATTCGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATGGTGATGGTGATGAGGGTTCATCAGCACCAGAGTTAATTAAGACCGAAAAACCATCATCTGGAACTATGATTACTCCTTATGTTGGAATGGTGTTTAAGAATGATGATGATGCTTTCGAGTATTATGGCAGTTTCGCTAGGAAGAATGGATTTTCGGTTAGGAAAGAGAGATCTAGAATTAGCCCTCAGCTAGGCGTTTACAAACGTGACTTCGTTTGTTACCGTTCCGGATTCGCCCCGATGAAGAAGAAGTCTAATGGAGAGAACCATAGAGATAGGAAATCGGTGAGGTGTGGATGTGATGCAAAGATGTATCTGTGTAAGGAGGTAGTAGAAGGGGTTCCCCAATGGTTTGTTGTGCAATTTAGTAATGTACATAATCACGAGCTTTTGGAGGATGATCAAGTGCGTCTACTTCCTGCTTATCGAAAGATTCACGAGGCTGATCAAGAGCGTATACTCTTGCTTTCTAAAGCTGGGTTTCCAATACATCGGATAGTGAAAATGCTTGAACTGGAAAAGGGGATTCAGGGTGGGCAACTGCCTTTCTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAATGGGGCATTGCTTAGTGAGAAAAGAGAAAATGATGTATTGGAACTTCTTGAGGCGTGCAAAGCTATGAAAGAAGCAGATGGTGACTTTGTTTATGATTTTACAGTGGATGAGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGTGAATCTGTAAATGCAAATGCTATGTTTGGCAATGTAGTTTATTTTGACACTACATATAGATCAATCACTTATGGATTGCTTTTTGGAGCATGGTTTGGTATTGATAGCTATGGTAGAACCATTTTTTTCGGTTGTTGTTTATTGCAGGACGAAACACCCCAATCTTTCTCATGGGCATTGCAGACATTTGTCCGACTCGTGAGTGGAAGATGTCCACAAACAATTCTAACTGATCTAGATCCCAGGCTTGGAGATGCCATCAAAAGCAAATTTCCAGGCACAAAACATGTCATTCCTCTATGGAACATTATGTACAAGGTACCCACTTGGTTTTCTCTTCTTCTTGGGTCTCGCTATGAAGAATTTAAATTCGAGTTCGATGTCTTATTCCACATTGAGAATACAGAGGAATTTGAACTTCGGTGGAGCCAAATGATTTCTGTGTTTGGACTTGGTTCAGATAAACATATTGATTTACTGTATTCTGTTCGAGCATCCTGGGCACAATCCTACGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATACCTTACTCAAAATCTATAGATGCATTTCTGAAAGGGATCTTCACTGAACATTCATGCTTGCGTGGCTTTTTTGATCAGGTTGGCATTTCTGCAAATTTTCAACATCAAGCATGTCTGGAGATTCAATATATACATCTGAAAACTTGCTTGCCGATTGAAGAGCAAGCACGGAGCATTCTCACGCCATTTGCTTTTAATGCCTTGCAGCAGGAACTATCACTCGCAATGCAATATGCTACAACTGAAATGGCCAATGGATCATATATTGTGCGGCACTTCAAAAGGATGGATGAAGAACGGCTCGTAATATGGTTGCCTGAAGACGAGCAGATACACTGCTCGTGCAAGGAATTCGAATCTTCTGGAATATTATGCAGACATGCTCTTCGCATATTTGTTGTAAAGAATTACTTTCAGCTGCCTGACAAGTACTATTTGACTAGATGGAGACAAGAATGTTCTTCACTTATCGACGCTGATCATAATAATCAAAGTATTGGTGGTGAATGGTTCCAAGAATATCAGTCCATGGCTGAAACTTTGTTTTCAGAATCATCGGTTACAAGGGAGCGATCTGACTATCTTCGTAGAGAACTGACAAAGGAACTTACTAGGATTCTTAATGAGGTTAGAAATCTGCCGGAGACCGATGGAGACTGCATGAACATGACAGTTTTGCCAACCAGTTAA 2082 0.4059 MSSIPSKNLWIRRQQCPCGDWKCYITYEGDGDGDEGSSAPELIKTEKPSSGTMITPYVGMVFKNDDDAFEYYGSFARKNGFSVRKERSRISPQLGVYKRDFVCYRSGFAPMKKKSNGENHRDRKSVRCGCDAKMYLCKEVVEGVPQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENGALLSEKRENDVLELLEACKAMKEADGDFVYDFTVDENDKVENVAWSYGESVNANAMFGNVVYFDTTYRSITYGLLFGAWFGIDSYGRTIFFGCCLLQDETPQSFSWALQTFVRLVSGRCPQTILTDLDPRLGDAIKSKFPGTKHVIPLWNIMYKVPTWFSLLLGSRYEEFKFEFDVLFHIENTEEFELRWSQMISVFGLGSDKHIDLLYSVRASWAQSYVRGYFLARMATIPYSKSIDAFLKGIFTEHSCLRGFFDQVGISANFQHQACLEIQYIHLKTCLPIEEQARSILTPFAFNALQQELSLAMQYATTEMANGSYIVRHFKRMDEERLVIWLPEDEQIHCSCKEFESSGILCRHALRIFVVKNYFQLPDKYYLTRWRQECSSLIDADHNNQSIGGEWFQEYQSMAETLFSESSVTRERSDYLRRELTKELTRILNEVRNLPETDGDCMNMTVLPTS* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0339 693 ProSiteProfiles Zinc finger SWIM-type profile. 565 600 IPR007527 GO:0008270
Lan16g0339 693 Pfam SWIM zinc finger 572 596 IPR007527 GO:0008270
Lan16g0339 693 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 683 IPR031052 GO:0006355
Lan16g0339 693 SMART 26again6 575 602 IPR006564 GO:0008270
Lan16g0339 693 Pfam MULE transposase domain 293 385 IPR018289 -
Lan16g0339 693 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 30 683 - -
Lan16g0339 693 Pfam FAR1 DNA-binding domain 70 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0339 Lan-Chr16 2750462 2753383 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan16g0339 MULE 2.4e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0339 - - aprc:113874854 1217.22