Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0326 ATGGACTCGAAAACTAGTGCAATAGCTGTCCCAAAACAGCATCCAGACACATCTGGGATTGAACCCCTTAAGGCAAAAGACATCAGGCCTCCTTCACTGCCGATTTCGAAGACATGCAAACCTGAGCAATATGTTCCTGAAGATATGTCGAAGTCTGTACAAAATTCATCAAGGCAGAATACTGTGGAAATTCCTGATATGAAGAAGTTAGGAATTTCAGCCCATAAGGGGTCTGCATCTTCATCCGTCCTCGACAAAGAAGTAGATCAAGCTGTTAATGAGAACGTAGGCTCACAGGAAATCTCTATTGATCATGACAAAAAGACATCGGGATATGGAAGCGTGAAGAACAGTCCTGTTTCTGCTAAAATTAGTGATGGGGCCTGCAGTATTGCAAAGACGAGTGGAAGTGCCAAGATTAGTGACCGTGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGCAAGTACAAGCAGTGATGTGAGCGATGAGAGTACTTGTAGTAGCTTTAGTGGCAGCATAAACAAGCCTCATAAGGCAAACGACATTAGATGGGAAGCTATCCAAGTTGTTCGAACAAGAGATGGGGTATTGGGTTTAGGTCACTTTAGACTGCTGAAGCGGTTGGGATGTGGCGATATCGGCAGTGTATATCTCTCTGAGTTGAGTGGAACTAAATGTCACTTTGCTATGAAGGTGATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTACTTCGCGCTCAGACCGAGAGAGAAATTCTTCAGTCACTTGACCACCCCTTTCTCCCAACTTTGTATACCCATTTTGAGACAGAGAAATTCTCATGCTTGGTAATGGAGTTCTGCCCTGGTGGGGACCTCCATACGCTTCGGCAGAAGCAGCCAGGAAAGCATTTTCCTGAGCAGGCAGTGAAGTTTTATGTGGCAGAGGTCCTACTAGCTTTGGAGTACCTCCACATGCTTGGAATTGTCTACCGTGACCTGAAGCCTGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCAACCCTGGTAAAAAGCACAATCATGGATTCCGAGTCTTTAAGAAAGAATCCAACATATTGTGTCCAGCCTGCATGTATTGAGCCACCTTCCTGCATCCAGCCATCATGTGTTGCTCCTACCACATGCTTTTCACCGCGGTTCTTCTCTAGCAAATCAAAGAAGGAACGCAAGCCCAAAAATGAAATTGGCAACCAAGTGAGTCCGTTACCCGAGCTCGTTGCTGAGCCTACCGATGCTCGGTCTATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATTAAGGGTGAAGGTCACGGGAGTGCAGTTGATTGGTGGACTTTTGGAATTTTTCTATATGAGCTGTTGTTTGGTAAGACTCCTTTTAAGGGTTCCGGAAACCGAGCAACATTGTTTAATGTTGTAGGTCAGCCGCTGCGATTTCCAGAAGGGCCTGTTGTCAGTTTCGCAGCAAGGGATCTTATAAGAGGGTTGCTCGTAAAGGAACCTCAGCACAGATTGGCATATAAAAGAGGTGCTACTGAGATTAAGCAACATCCCTTTTTCGAAGGTGTGAATTGGGCATTGATCCGATGTGCTACCCCACCCGAGATTCCAAAGCATGTCGAGTTAGAGAAGGTACCTTCACCAGCCTCATCAGCTGTTGAAAAAGCTGTTAATCATATGTCAATAGGTAATAATCAGAAAGGTCCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1806 0.4507 MDSKTSAIAVPKQHPDTSGIEPLKAKDIRPPSLPISKTCKPEQYVPEDMSKSVQNSSRQNTVEIPDMKKLGISAHKGSASSSVLDKEVDQAVNENVGSQEISIDHDKKTSGYGSVKNSPVSAKISDGACSIAKTSGSAKISDRADFVESGKSSICRASTSSDVSDESTCSSFSGSINKPHKANDIRWEAIQVVRTRDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCHFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSTIMDSESLRKNPTYCVQPACIEPPSCIQPSCVAPTTCFSPRFFSSKSKKERKPKNEIGNQVSPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEGPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKHVELEKVPSPASSAVEKAVNHMSIGNNQKGPDNYLEFDFF* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0326 601 SUPERFAMILY Protein kinase-like (PK-like) 182 565 IPR011009 -
Lan16g0326 601 PANTHER FLIPPASE KINASE 1-RELATED 4 601 - -
Lan16g0326 601 ProSiteProfiles Protein kinase domain profile. 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0326 601 MobiDBLite consensus disorder prediction 48 63 - -
Lan16g0326 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Lan16g0326 601 Gene3D Transferase(Phosphotransferase) domain 1 437 561 - -
Lan16g0326 601 Gene3D Phosphorylase Kinase; domain 1 203 288 - -
Lan16g0326 601 Gene3D Transferase(Phosphotransferase) domain 1 289 358 - -
Lan16g0326 601 Pfam Protein kinase domain 206 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0326 601 Pfam Protein kinase domain 440 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0326 601 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 4 601 - -
Lan16g0326 601 SMART serkin_6 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0326 601 CDD STKc_phototropin_like 204 561 - -
Lan16g0326 601 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0326 Lan-Chr16 2641625 2645953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0326 40 601 AGC Kinase Gene Family AT5G47750 77.876 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan16g0326 Pkinase 8.2e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0326 16 2641625 2645953 Lan16g0326 16 2641625 2645953 ECH
Lan4g0549 4 7960533 7964783 Lan16g0326 16 2641625 2645953 LSH
Lan19g0738 19 13791475 13795647 Lan16g0326 16 2641625 2645953 LSH