Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0314 ATGTATCATCCAAAGAACTTTCATAGTCAAAGTCTAATTGGAAGCAATTCATTAGTTCATGATCAGCTAATAGATTGTGGTGGCAGCACTATGGATCCTGGCAATGGAGGAAACAACACCAACAGCCCTAATGTGTCCTCAAAGCAACGTTTACGTTGGACACATGAGCTACATGAACGCTTCGTGGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCAAAAGGGGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACTATTTATCACGTCAAAAGCCATTTACAGAAATACCGTCTAGCAAAATACCTACCTGATTCCTCATCCGAAGAAGGAAAAAATGCTGACAAGAAAGAAATGGGGGATATGCTATCCAACCTTGATGGTTCACCTGGCATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTACAACTTCGGATCGAAGCTCAGGGTAAATACTTGAAAAAGATAATTGAAGAGCAACAACGACTCAGTGGGGTTCTTTCAGATGCACCTGGCTCTGGGGTTACAGCTTCAGCTCAAGGTGGAATGTACCAAGAACATGATAACAAGACTGACCCGGCAACTCCTGACCCGGAAAAGGCTGCCAAAGAGCGTGCCCCGGCAAAGAGTCTCTCAATCGAATCTTTTTCATCTCACCATGAACCATTGACTCCTGATTCTGGCTGCAATGTTGGTTCCCCGGCTGAGAGCCCTAAAGGCGAGAGATCAACCAAGAAGCAAAGGATAAGCATGGAGGAAGCAGTATATTCTAAACCGGAAATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATCATACCAGCAGGCAAACACTGTTTTCCTTTGCCAAGAGCAATTTGACCCTTCATTGAGGGGTATATCTGGCAGAAGCGGCGAGGGGTTGGAGAAGTAA 975 0.4605 MYHPKNFHSQSLIGSNSLVHDQLIDCGGSTMDPGNGGNNTNSPNVSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSEEGKNADKKEMGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSDAPGSGVTASAQGGMYQEHDNKTDPATPDPEKAAKERAPAKSLSIESFSSHHEPLTPDSGCNVGSPAESPKGERSTKKQRISMEEAVYSKPEMVLPHQILESSMSSYQQANTVFLCQEQFDPSLRGISGRSGEGLEK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0314 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 312 - -
Lan16g0314 324 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Lan16g0314 324 MobiDBLite consensus disorder prediction 190 204 - -
Lan16g0314 324 MobiDBLite consensus disorder prediction 27 47 - -
Lan16g0314 324 Coils Coil 138 158 - -
Lan16g0314 324 MobiDBLite consensus disorder prediction 32 47 - -
Lan16g0314 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 312 IPR044848 GO:0003700
Lan16g0314 324 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Lan16g0314 324 MobiDBLite consensus disorder prediction 184 267 - -
Lan16g0314 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 105 IPR017930 -
Lan16g0314 324 MobiDBLite consensus disorder prediction 209 226 - -
Lan16g0314 324 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Lan16g0314 324 Gene3D - 47 106 - -
Lan16g0314 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0314 Lan-Chr16 2536664 2542299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0314 83 313 G2-like Transcription Factor Family AT2G01060 65.000 6.59e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan16g0314 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0314 - - lang:109334185 531.176