Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0307 ATGCTCAGTTTTCAGAAATTTCCTCTCTTTTTGTTGACAGTGTTGTTTCTGAGTCTTGGGTATGTATCAGGCAAGAAATGCATTGATAAGTGTGGACATGTTCATATTCAATTCCCATTTTATCTCAGAAATAGTAACACCACCACTTATCCTCATGGCTTTGATTTATCATGCACCCCTCAACATGAAACTATACTAAATCTACCAGCTATTCCAATAAATCTGTTCATCAAACGCATAGATTATCAAGCTCAGAAAATTGAAGTTTATGATCCTCACTCTTGTCTTCCAAGCCTTCTTCTAAACTTAACCAATTCATCAATATCTCCTTTTCAGTACAAATCACCAGATTATGATTCTGATATTGTTAAGCATAATGTTTCATTCTTTCACTGCTCTTCAACATATTCCTCTTCTTGTCCAATTTTGCAACTTGAATCTGATGGAGATTTCGTTGATTCTGGAATAGTATCTTGTACTAAGGAGCTTGATGTTTTATCAGTTGGGTGGTTGCTTTCTTACAATGATCCTGATACTTTGCTTTTGGGCTGGTCGAAGCCGGATTGTACTTCGTGTGCAACACATGGCATGAAATGTAGATTCAAGAACAATGGTACTAGTGGTGAAACTGAATGTTTCATCTGCAAAACAAACAAGTTAGCAACATCAGCTATTGTACTAATTTCTGCAGGGGTGATAATTGGTTTTATGCTGTTGATGCTGTTGGTGATTGCATTGCTTTACATGTATCGGTATTTTAAGATGAGAGGGGATGATCAGACTAGGATTGAAAAGTTCTTGGAGGATTATCGGGCGATGAAGCCTACAAGGTTCACTTATGCTGATATTAAGAGAATAACTGCTAGTTTTAAGGAAAGTTTAGGGGAAGGAGCTCACGGAGGCGTATTCAAAGGTATGCTTTCCCAAGAAATTCTGGTTGCTGTGAAGATGCTCAATGAAACACAAGGAGATGGTAAGGATTTCATAAATGAAGTAGGGACTATGGGCAAAATCCATCATGTTAATGTCGTTCGTTTGCTTGGATTCTGCGCTGATGGATTTCACCGCGCTCTTGTCTACGATTTCTTTCCAAATGGTTCGCTGCAGAGATTCTTAGCTCCACCAGACAACAAGGAAGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTCGCCAGAGGAATCGAGTATCTCCATCTAGGCTGCGATCATCGAATACTTCATTTCGACATCAATCCTCACAATGTGTTACTAGATGACAACTTCACTCCAAAGATTACCGATTTTGGACTCGCTAAATTGTGTCCTAAAAACCAAAGCACCGTATCCATGACAGCGGCTCGAGGAACCTTAGGCTACATTGCCCCTGAAGTTTTCTCACGAAACTTCGGGAACGTGTCGTATAAGTCAGACATTTACAGCTACGGAATGTTGCTACTAGAGATGGTTGGAGGCAAAAAGAATACAAATATATCAGCTGAGGAAACTAGTTTCCAAGTTCTATATCCAGAATGGATTCATAATTTGATTGAAGACAAAGATATACAAGTTAATATTGAGGATGAAGTAGATAGTAAAATTGCTAAGAAACTTGCCATTGTAGGACTTTGGTGCATTCAATGGAACCCAATTGATCGTCCATCCATAAAAACTGTGGTGCAAATGCTTGAAGGGGAAGGAGACAAATTAGTAGCACCTCCTACTCCTTTTGATTCAACTACTTCATCAAGATCAAATGTTCCAATAAGGCATATGAATTTTGAGCTAGAAGTTATTCATGAAATAGAGTAA 1800 0.3867 MLSFQKFPLFLLTVLFLSLGYVSGKKCIDKCGHVHIQFPFYLRNSNTTTYPHGFDLSCTPQHETILNLPAIPINLFIKRIDYQAQKIEVYDPHSCLPSLLLNLTNSSISPFQYKSPDYDSDIVKHNVSFFHCSSTYSSSCPILQLESDGDFVDSGIVSCTKELDVLSVGWLLSYNDPDTLLLGWSKPDCTSCATHGMKCRFKNNGTSGETECFICKTNKLATSAIVLISAGVIIGFMLLMLLVIALLYMYRYFKMRGDDQTRIEKFLEDYRAMKPTRFTYADIKRITASFKESLGEGAHGGVFKGMLSQEILVAVKMLNETQGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKEVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDNFTPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGKKNTNISAEETSFQVLYPEWIHNLIEDKDIQVNIEDEVDSKIAKKLAIVGLWCIQWNPIDRPSIKTVVQMLEGEGDKLVAPPTPFDSTTSSRSNVPIRHMNFELEVIHEIE* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0307 599 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Lan16g0307 599 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Lan16g0307 599 Pfam Protein kinase domain 291 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0307 599 Gene3D Transferase(Phosphotransferase) domain 1 363 566 - -
Lan16g0307 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 42 599 IPR045874 GO:0004672
Lan16g0307 599 Gene3D Phosphorylase Kinase; domain 1 262 362 - -
Lan16g0307 599 SUPERFAMILY Protein kinase-like (PK-like) 268 560 IPR011009 -
Lan16g0307 599 ProSiteProfiles Protein kinase domain profile. 288 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0307 599 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 42 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0307 Lan-Chr16 2482110 2484335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0307 188 572 Receptor kinase-like Gene Family AT1G66910 43.765 1.69e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan16g0307 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0307 - - gmx:100819302 845.114