Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0300 ATGGCTCATTCAGCTGAACCTTCATCATCTTTAAGCTTTACATCATCTTTATCGAATGGTTCAGTCAACCACAACATGTGTACTTCTTATGGCACTGATCCTGGTCTTAACCTTGATGTCATAAGTTTGAGTAAGCTTAGCTCTAATTTGGAGCAGCTTTTGGTTGAATCTGATTCTGATTATAGTGATGCTGACATCGTAGTTGAAGGAATTTCGGTCGGTGTTCATCGATGTATCCTGGCCTCTAGGAGTAAGTTTTTCAATGAATTATTCAAGAAAGAGAAAAACTCATCAGAAAAAGAAGGGAAGTTGAAGTATTTCATGAGTGATATGTTGCCTTATGGTAAGGTTGGATATGAAGCCTTCAACATATTTCTAGGCTATGTATATACCGGAAAAATAAAGCCCTCTCCGACCGAGGTATCTACTTGTGTTGACAATGTGTGTCTTCATGATTCCTGTAGACCTGCAATTAACTTTGCTGTGGAATTGATGTATGCATCATCTATTTTTCAAATACCGGAGTTGGTATCACTTTTCCAGAGACGTCTTCTTAACTTTATAGGAAGGGCACTTGTGGAAGATGTTATACCAATTCTCATGGTTGCTTTCCATTGTCAATTGAGTCAACTTGTCACTCAATGTGTTGACAGGGTCGCACGATCAGACCTAGACTGGATCTCTATTCAGAAAGAGCTTCCGTTTGAGCTATCAGAAAATGTTAAATTGCTTCGCAACCCTAAGAAAGATGTTGAAAATGATGATCCTCCTGTAGTGGACACTATATCTCTAAAACGAATCGTTAGAATACACAAGGCATTAGACTCAGATGATGTTGAGCTTGTTAAACTTCTTTTGAATGAGTCAGAAATTACTTTAGATGGAGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGATCCGAAGGTTGTTTCTGAGGTACTTAGTTTGGGTCTGGCTGATGTCAATCTTCGGAATTCTCGGGGATACACGGTTCTTCACATTGCTGCCATGCGTAAGGAGCCTTCCATTATAGTATCACTTCTTACAAAAGGAGCTTTTGCATCAGATTTGACATTTGATGGTCAGAGTGCTGTTAGTATTTGCAAAAGGTTGACAAGGCCAAAGGATTATCATGCAAAAACAGAACAGGGGAAAGAAACAAACAAAGATCGGATATGCATCGATGTCCTTGAAAGAGAAATGCGAAGGAATCCATTGGCTGGGGATGCCTCTATATCTTCCCACACAATGGCCGATGATATCCACATGAAGCTACTATACCTCGAGAACAGGGTGGCATTTGCGAGACTATTGTTCCCTTCGGAAGCCAAACTAGCCATGGACATCGCACATGCTGAGACAACATCGGAGTTTGCTGGTATTTCTGCACCTAAAGGTTCAAATGGAAGCATCAGGGAGGTTGATCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCCAGGATGGAAGCCCTAATGAAAACAGTGGAGATGGGACGACGCTATTTTCCTCATTGCTCGGAAGTGTTAGACAAGTTCATGGAAGATGACCTGCTTGATTTGTTTTACCTCGAGAAGGGAACCCGAGAAGAGCAAGGAGTGAAGAGGAAGCGTTTCATGGAGCTCAAAGATGATGTCTACAAGGCTTTCACCAAGGACAAGGCTGGGTTTAGCCGCACCGGCATTTCAACTTCATCATCCTCTTCATCTCTCAGAGATTCTGTACATTACAAAGCTAGGAAAGTGTGA 1758 0.4152 MAHSAEPSSSLSFTSSLSNGSVNHNMCTSYGTDPGLNLDVISLSKLSSNLEQLLVESDSDYSDADIVVEGISVGVHRCILASRSKFFNELFKKEKNSSEKEGKLKYFMSDMLPYGKVGYEAFNIFLGYVYTGKIKPSPTEVSTCVDNVCLHDSCRPAINFAVELMYASSIFQIPELVSLFQRRLLNFIGRALVEDVIPILMVAFHCQLSQLVTQCVDRVARSDLDWISIQKELPFELSENVKLLRNPKKDVENDDPPVVDTISLKRIVRIHKALDSDDVELVKLLLNESEITLDGANALHYAAAYCDPKVVSEVLSLGLADVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGAFASDLTFDGQSAVSICKRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPLAGDASISSHTMADDIHMKLLYLENRVAFARLLFPSEAKLAMDIAHAETTSEFAGISAPKGSNGSIREVDLNETPIMQNKRLLSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLLDLFYLEKGTREEQGVKRKRFMELKDDVYKAFTKDKAGFSRTGISTSSSSSSLRDSVHYKARKV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0300 585 MobiDBLite consensus disorder prediction 562 585 - -
Lan16g0300 585 CDD BTB_POZ_NPR_plant 45 188 - -
Lan16g0300 585 Pfam Ankyrin repeats (3 copies) 271 353 IPR002110 GO:0005515
Lan16g0300 585 SUPERFAMILY Ankyrin repeat 266 371 IPR036770 -
Lan16g0300 585 Gene3D Potassium Channel Kv1.1; Chain A 38 220 IPR011333 -
Lan16g0300 585 Gene3D - 238 403 IPR036770 -
Lan16g0300 585 SMART ANK_2a 294 324 IPR002110 GO:0005515
Lan16g0300 585 SMART ANK_2a 265 293 IPR002110 GO:0005515
Lan16g0300 585 SMART ANK_2a 328 360 IPR002110 GO:0005515
Lan16g0300 585 Pfam BTB/POZ domain 59 178 IPR000210 GO:0005515
Lan16g0300 585 ProSiteProfiles Ankyrin repeat region circular profile. 328 353 - -
Lan16g0300 585 PANTHER REGULATORY PROTEIN NPR3 8 573 - -
Lan16g0300 585 PANTHER REGULATORY PROTEIN NPR3 8 573 IPR044292 GO:0009862|GO:2000022|GO:2000031
Lan16g0300 585 Pfam NPR1/NIM1 like defence protein C terminal 370 572 IPR021094 -
Lan16g0300 585 SUPERFAMILY POZ domain 50 187 IPR011333 -
Lan16g0300 585 MobiDBLite consensus disorder prediction 562 576 - -
Lan16g0300 585 ProSiteProfiles Ankyrin repeat profile. 328 353 IPR002110 GO:0005515
Lan16g0300 585 ProSiteProfiles BTB domain profile. 62 138 IPR000210 GO:0005515
Lan16g0300 585 SMART BTB_4 62 188 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0300 Lan-Chr16 2409337 2413448 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan16g0300 NPR1_like_C 2.8e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0300 K14508 - gmx:100217338 946.421