Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0299 ATGGACAAAACTTACTTTCTTTTCACTTTACTATTCTCATTTCACTATTTCATGGCAATGGCTTCCTTAGATATAGACCAATCTGCATTACTAGCCTTTAAATCTTATATAACTTTAGACCCTCAAAACATATTGGCCAATAATTGGTCTACTTCATCCTCAAAGTGCAACTGGGTTGGGGTCACTTGTGATGCCAACTTCAGTAGAGTCATAACCCTAACTCTACCAAACATGGGTTTAAATGGTACAATTCCTTCTAACTTGGGAAATTTATCTTCTCTTGTTGAACTTGACCTTCACAACAATAGCTTTCATGGAATAGTTCCCAATGAGTTGGCCTTGTTATCTAGGTTGGAGAGTTTCAACTTATGCAACAACAATTTTGGTGGAGAATTTCCAACATGGGTGGGGGAGTTATCTAAACTAGAGTTTCTGAGTCTATGTAATAACAGTTTTTCAGGTTCAATTCCTGCATCACTATCCAACTTGGAAGGGCTAGAGAGATTGGATTTGAGCTTTAATTCCATTGAGGGGAGCATTCCACCAGAGCTTGGAAGGCTTCCAAACTTGACTGTTTTGGATTTGGCACACAATGGGCTATCTAGTGATATTCCTTCTTCAATCTTCAATATTTCCACACTGCAAGTGGTTGATTTGTCCTATAATTCCTTATCAGGAAACATTCCTCAAAAACTTGGAGATTTGTCAGAGCTTAGAAGTATAAATTTGAGCATAAATAAACTTGAAGGCTCTATACCATTGTCATTGTTCAACATGTCAACTCTTGAAGAGATTCAATTCACTTACAATAATTTATCTGGTTCTCTTCCAATGGACTTGTGTAATGGAGTTCCAATGCTTGAAATGCTTGACCTATCTGGCAATGCATTTTCTGGTCTATTTCCATCAAATTTGCTTCAATGTAAACAGCTCAAATATTTGAAGGTTATTGGTAATAGATTAAATGGTAACATATCTAATGAGATTGGGAAATTACCTATGCTTCAGGTGTTGGATCTTAGTAACAACAATATAACAGGTGAAGTTCCAGCATCTCTTTTCAACATCTCCACTTTGAGAGTAATTAATCTAAGGGACAATTTCTTTATTGGTAAACTTCCACAAACAATGTGTCAGAATTCTCCCTTACTTCAACAGTTTAATTTAACAAATAATAAAGTTGGAGGAATCATTCCAAAGTCTATTAGCAACTGCACCTCATTGAAAAGTTTACTAATGGGATTCAACTTTTTCACAGGTACCATACCTTATGAGCTTGGTGAGTACTTGAAAAACCTTGCTATATTGCATTTGCAAAATAACAACTTGAGAGGATCTATTCCATCAAGTATCTTCAACATCTCAGGGTTACAAAGTCTGTCACTATCATATAACCAACTCTCAGGAAATCTTCCAATTTATCCATATCATACCCTTTCCAATCTCCAATTCCTTTACCTTACAAACAATTCTCTGAGTGGAGAAATTCCTACTAGTCTTTTCAATGCTTCAATGCTTTCTAGCCTATTACTTATCAACAATTCATTCACAGGAGTTATACCTGATTCTATAGGAAATTTAATAAACCTACAACAACTTGGACTATTAGGAAACAATTTGACTAGTGATCCAGCTTCTTCAGAAATTAGTTTCCTAACTTCATTGACAAAGTGTAGGAAACTAAAAAGTCTTGTATTATCATACAATCCTCTAAATGGAGTACTTCCAAGTTCTATAGGAAATCTCTCAAACTCATTGCAATCTTTTTTAGCATGGAACTGTAATCTCAAGGGTCAAATTCCTTCACAGATCAGAAATTTAAAGAACTTGTTCGATATTAGTCTTCGCGACAATCAACTCTTCGGACAAATTCCTAGTACAGTTGGCTCTTTGTTGTTTCTCCAACGTTTGGATCTTTCAGACAACAACCTTAATGGCTCTATCCCAGATCAGATTTGTCAACTAACAAATTTGGCTGAGATGTCTCTTAACAATAACAATATTTTTGGGCTAGTGCCAGAATGCTTGGGGGGTCTTACAAAACTGAGAAAACTTTATTTGGATAACAATAACCTAAACTCTATTATACCTTCTACCCTTTGGAGCCTTAGTGACATATTGGAAGTGAGTTTATCTTTTAATGGTTTTAGTGGATCTTTGCCAACTGATATAAGTGGCATGAAAGCTGTGATAAAATTGGATATATCAAATAATAAGCTTTCAGGGAATATTCCTAGTGATATTGGTGATTTACAGAAATTAATAAACCTCTCATTAGCAAATAATATGTTACAAGGGCCTATTCCTGATTCATTTGGCAGCATGCTAAGTTTGGAATATTTGGACCTTTCCAACAATACTTTATCAGGCATTATCCCCAAGTCTCTAGAGAAACTTGTTTATCTCCGATTTATCAACTTGTCTTATAATAGATTAGAAGGAGAAATTCCTTCTGGTGGTGAATTTGCAAATTTCACAGCTAAATCATTCATGATGAATAGTGCACTCTGTGGTAGACCTGATCTACATGTTCCACCATGTCCTAGAGGAGCAGAACATGGCAAGAAAACCAAAAAGCTTGTGTTGAAGTTGGTTTTACCCTTAACTCTTTTTGGTGCACTTATTGGTTTTGCATTTCTCATAATACACATGAGAAAATATAGTAAAGGGTCAAGTATTGTTGTCTTACCATCATTCCGATTTGCGAGTCGAATTTCCTACTATGAACTTTCGGATGCAACTAAAAGTTTTGATGATAGCAATCTTATTGGTAAAGGGGGTATTGGTTCTGTATTCAGAGGTGTGCTTTCAAATGGAATGGTTGTTGCAGTTAAAGTCTTCAACTTGGATGTGCAAGGGGCATCAAGGAGTTTCGACATAGAATGTGAAGCAATGCGCAATCTTCGTCATCGAAATCTAGTAAAAGTCATTACTAGCTGTTCAAATGAATTTGATTTCAAAGCTCTAGTAATTGAATTTGTGCCAAATGGTAGCTTGGAGAAGTGGTTGTATTCTTATAACTATTTCATTCCTTTTTTACAAAGGTTGAATATAATGATAGATGTTGCATCTGCTTTGGATTATCTTCATTATGGTAATTCAAAACCAGTGGTGCACTGTGACTTGAAGCCAAGTAATGTTTTGTTGGATGAAGATATGGTTGCTCATGTTTGTGACTTTGGCATTGCTAAACTCTTAGAAGAAGGACAATCTAGAGAACTTACCAACACCTTAGCAACTATTGGTTACATGGCTCCAGAATATGGATCAGAAGGTATTGTGTCTATTAAAGGAGATGTGTATAGCTATGGTGTTATGCTGATGGAAGTGTTTACAAGAAAGAGGCCAACAGATGAAATGTTTATAGATGGACTAAGCTTAAGGTCATGGATTAAAGATTCATTATTACTAAATGAGATCATTCATATTGTTGATCCTAACTTGATGGAGGAAGAGGAATTATTTATTCCTCCAAAGAAAGTAGCTTTATTAAGTATCATGGAGTTGGCTTTCAATTGTTCTTCAGATTCACCAGCTGAGAGAATGAACATGAAGGAAGTCTTAGACAGCTTAAACAAAATAAGAACCATATTTTTACAGATTGTATAA 3609 0.3541 MDKTYFLFTLLFSFHYFMAMASLDIDQSALLAFKSYITLDPQNILANNWSTSSSKCNWVGVTCDANFSRVITLTLPNMGLNGTIPSNLGNLSSLVELDLHNNSFHGIVPNELALLSRLESFNLCNNNFGGEFPTWVGELSKLEFLSLCNNSFSGSIPASLSNLEGLERLDLSFNSIEGSIPPELGRLPNLTVLDLAHNGLSSDIPSSIFNISTLQVVDLSYNSLSGNIPQKLGDLSELRSINLSINKLEGSIPLSLFNMSTLEEIQFTYNNLSGSLPMDLCNGVPMLEMLDLSGNAFSGLFPSNLLQCKQLKYLKVIGNRLNGNISNEIGKLPMLQVLDLSNNNITGEVPASLFNISTLRVINLRDNFFIGKLPQTMCQNSPLLQQFNLTNNKVGGIIPKSISNCTSLKSLLMGFNFFTGTIPYELGEYLKNLAILHLQNNNLRGSIPSSIFNISGLQSLSLSYNQLSGNLPIYPYHTLSNLQFLYLTNNSLSGEIPTSLFNASMLSSLLLINNSFTGVIPDSIGNLINLQQLGLLGNNLTSDPASSEISFLTSLTKCRKLKSLVLSYNPLNGVLPSSIGNLSNSLQSFLAWNCNLKGQIPSQIRNLKNLFDISLRDNQLFGQIPSTVGSLLFLQRLDLSDNNLNGSIPDQICQLTNLAEMSLNNNNIFGLVPECLGGLTKLRKLYLDNNNLNSIIPSTLWSLSDILEVSLSFNGFSGSLPTDISGMKAVIKLDISNNKLSGNIPSDIGDLQKLINLSLANNMLQGPIPDSFGSMLSLEYLDLSNNTLSGIIPKSLEKLVYLRFINLSYNRLEGEIPSGGEFANFTAKSFMMNSALCGRPDLHVPPCPRGAEHGKKTKKLVLKLVLPLTLFGALIGFAFLIIHMRKYSKGSSIVVLPSFRFASRISYYELSDATKSFDDSNLIGKGGIGSVFRGVLSNGMVVAVKVFNLDVQGASRSFDIECEAMRNLRHRNLVKVITSCSNEFDFKALVIEFVPNGSLEKWLYSYNYFIPFLQRLNIMIDVASALDYLHYGNSKPVVHCDLKPSNVLLDEDMVAHVCDFGIAKLLEEGQSRELTNTLATIGYMAPEYGSEGIVSIKGDVYSYGVMLMEVFTRKRPTDEMFIDGLSLRSWIKDSLLLNEIIHIVDPNLMEEEELFIPPKKVALLSIMELAFNCSSDSPAERMNMKEVLDSLNKIRTIFLQIV* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0299 1202 Pfam Protein kinase domain 919 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 379 427 IPR032675 -
Lan16g0299 1202 ProSiteProfiles Leucine-rich repeat profile. 681 702 IPR001611 GO:0005515
Lan16g0299 1202 Gene3D Transferase(Phosphotransferase) domain 1 994 1198 - -
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 282 378 IPR032675 -
Lan16g0299 1202 SUPERFAMILY Protein kinase-like (PK-like) 893 1191 IPR011009 -
Lan16g0299 1202 SUPERFAMILY L domain-like 373 516 - -
Lan16g0299 1202 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lan16g0299 1202 SMART serkin_6 917 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0299 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 407 1199 - -
Lan16g0299 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 139 281 - -
Lan16g0299 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 17 140 - -
Lan16g0299 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 285 425 - -
Lan16g0299 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 189 326 - -
Lan16g0299 1202 SMART LRR_typ_2 775 798 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 679 702 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 139 162 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 430 454 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 91 114 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 163 186 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 284 308 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 727 751 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 332 356 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 631 654 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 235 259 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 479 503 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 655 678 IPR003591 -
Lan16g0299 1202 SMART LRR_typ_2 187 211 IPR003591 -
Lan16g0299 1202 Gene3D Phosphorylase Kinase; domain 1 900 993 - -
Lan16g0299 1202 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Lan16g0299 1202 Pfam Leucine rich repeat 753 812 IPR001611 GO:0005515
Lan16g0299 1202 Pfam Leucine rich repeat 358 416 IPR001611 GO:0005515
Lan16g0299 1202 Pfam Leucine rich repeat 188 248 IPR001611 GO:0005515
Lan16g0299 1202 Pfam Leucine rich repeat 634 692 IPR001611 GO:0005515
Lan16g0299 1202 ProSiteProfiles Leucine-rich repeat profile. 777 798 IPR001611 GO:0005515
Lan16g0299 1202 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 285 425 - -
Lan16g0299 1202 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 189 326 - -
Lan16g0299 1202 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 140 - -
Lan16g0299 1202 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 407 1199 - -
Lan16g0299 1202 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 139 281 - -
Lan16g0299 1202 SUPERFAMILY L domain-like 39 367 - -
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 546 855 IPR032675 -
Lan16g0299 1202 ProSiteProfiles Protein kinase domain profile. 917 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0299 1202 PRINTS Leucine-rich repeat signature 634 647 - -
Lan16g0299 1202 PRINTS Leucine-rich repeat signature 775 788 - -
Lan16g0299 1202 SUPERFAMILY RNI-like 478 818 - -
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 428 545 IPR032675 -
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 179 281 IPR032675 -
Lan16g0299 1202 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Lan16g0299 1202 SMART LRR_sd22_2 558 584 - -
Lan16g0299 1202 SMART LRR_sd22_2 655 681 - -
Lan16g0299 1202 SMART LRR_sd22_2 139 165 - -
Lan16g0299 1202 SMART LRR_sd22_2 430 456 - -
Lan16g0299 1202 SMART LRR_sd22_2 187 213 - -
Lan16g0299 1202 SMART LRR_sd22_2 775 796 - -
Lan16g0299 1202 SMART LRR_sd22_2 479 505 - -
Lan16g0299 1202 SMART LRR_sd22_2 332 358 - -
Lan16g0299 1202 Pfam Leucine Rich Repeat 335 353 IPR001611 GO:0005515
Lan16g0299 1202 Pfam Leucine Rich Repeat 560 582 IPR001611 GO:0005515
Lan16g0299 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1037 1049 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0299 Lan-Chr16 2398280 2404113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0299 1 1195 Receptor kinase-like Gene Family AT5G46330 34.178 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan16g0299 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0299 - K13420 gmx:100784397 1125.92