Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0296 ATGAAGGAAGGGTGTGGAAGGAAGCATGGTGCAGCCACACCTTGTGCTGCATGTAAACTTCTGAGGAGAAAGTGTGGTCAGGATTGTGTTTTTGCACCATATTTTCCACCTAATGAGGCCCACAAATTTGCCAATGTACACAAAGTGTTTGGTGCTAGCAATGTTAACAAGATGCTTCAGGACCTACCAATGCATCAAAGAGGGGATGCAGTGAGCAGCATGGTGTATGAAGCAAATGCCAGAGTGAGAGACCCTGTGTATGGTTGTGTAGGAACCATTTCTTCTCTTCAGCAGCACATTGATCTGCTTCAGACCCAACTGGCCCTGGCCCAAGCTGAAGTGGTTCATCTAAGGGTGTCTCAAACTAGATGCATTCCTAATCTTGTGCTTAGCCCAACTAATAGTGGCTCACCATCATCCAAGATCATGGGCTCTCATGCTAACCCTGTTTTTGATATGGACATGGTAGTGGACCAGGTTAGCTATGGTGATTCATTGTGGTCATGA 507 0.4615 MKEGCGRKHGAATPCAACKLLRRKCGQDCVFAPYFPPNEAHKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGTISSLQQHIDLLQTQLALAQAEVVHLRVSQTRCIPNLVLSPTNSGSPSSKIMGSHANPVFDMDMVVDQVSYGDSLWS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0296 168 Coils Coil 93 113 - -
Lan16g0296 168 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Lan16g0296 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 141 - -
Lan16g0296 168 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lan16g0296 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0296 Lan-Chr16 2382197 2383713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0296 1 168 AS2 family AT1G31320 65.116 2.92e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan16g0296 LOB 9.5e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0296 - - gmx:100794219 268.085