Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0273 ATGAAGTTCTTCAGCATTTTAGTATTATCCTTATCTTTCTTCTCAGTTATGGGGCAGCTACCTTCCCAGGATATCTTAGCATTGCTGGAATTTAAGAAAGGCATAAGGCTTGACCCTACTGGTTATGTCCTTAGTTCCTGGAATGAGGAATCCATCGACTTTGACGGATGCCCGTCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGTGTTGTCCTTGATAATCTAGGTCTCTCTGCTGACGCCGATTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGTCCAACAATTCCATATCGGGAAAACTACCTGACAACATTGGTGATTTCAAAAGCCTTCAATTCCTGGACATCTCCAATAACCTCTTTTCTTCATCGTTACCATCGGGAATTGGTAACTTAGGTAGCTTGCAGAATCTGTCATTGGCTGGGAATAACTTCTCTGGCCTAATTCCAGACACTATTTCAAAAATGGTTTCTATCCAGTCTTTGGATTTGAGCCGAAATTCCTTTTCCGGAGCACTGCCAGCATCATTGACTAAGCTGAAAAGCTTGGTATCTCTTAGCTTGTCTAATAATGGTTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTGATGCCTTCTCTTGAAAAACTTGACTTGCATGGGAATATGCTCGAAGGTCACTTAGATGCCGAATTTATTCTTTTATCAAGTGCGAGCTACGTAGATTTCAGCGATAATAGGCTAATAAGTTCTGACTCTCAGAGGCAGAAATTTCTACCGCGAATATCTGAAAGTATTAAGCATCTAAACCTAAGCCATAACCTGCTTACTGGGACATTGGTTAGTGGAGCTGAGCAAGCAATTTTTGAAAACCTGAAGGTGTTGGACCTCAGCTACAATAATTTGGGCGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTCAGGTCCTTAAGCTTAGCAACAACATGTTTTCAGGATTTATTCCTGACGGCCTACTAAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTTAGTGCCAACAATCTTTCAGGGCCACTAAGTATAATTACTTCAACAACACTGCATTTTCTTAATCTCTCGTCAAATGGATTCACTGGTGAGCTGCCACTACTGACTGGAAGCTGTACCGTACTTGATCTGTCGAACAACAACTTCGAAGGAAATTTAACCAGGATGGTGAAATGGGGGAACATAGAATATCTTGATCTTAGTGTGAATCGTTTGACTGGGAGCATCCCTGAGGCAACTCCTCAATTTTTGAGATTGAATTATTTGAATCTATCTCATAACTCTCTTAGCAACTTCCTGCCGAGAGTCTTAACACAGTATCCAAAGCTTAGAGTGCTTGACATTAGTTCCAACCAGTTAGATGGATTACTTCTAGCTGATCTGCTCGCAATGCCGACTTTGCAAGAGCTCCATCTTGAAAATAATATGATCTCTGGCAGCATTAATTTATCATCTTCTACTGGTCATTCCGATCTTCGGATTCTTGATCTTTCTCACAACTGGTTTAACGGGTATTTTCCTGATCAGTTTGGGTCATTACATGGCATGAAAGTTCTCAACATTGCTGGTAATAACTTTTCTGGTTCTCTTCCAACTGCCATTTCTAACATGATTTCTCTAGAATCCTTGGATATATCAGAGAATCACTTCACTGGCCCTCTACCAAATAACATGCCGGAGGGGCTCAATAACTTTAATGCTTCTCAAAATGATCTGTCTGGAGTTGTTCCAGAAGATCTTAGAAAGTTCCCTACTTCTTCTTTCTTTCCGGGGAATGCTAAGCTACATTTTCCAAATGTTCCTCCTGGAAAAACCGCTTCACCACCTGAAAGTTCCAAGAAGAAGCATATGAACACTATTGTTAAAGTAATAATTATAGTGTCATGTGTAGTTGCTCTCTTTATATTAATTTTGCTTGCTATCTTTATACACTACATACGTATATCAAGATCTTCACCAGAATACGATACAAGTAAGGATATCCACGGGCGTGCTCAACCAATCATCTCTGGCCCTGTCCCCGTTTGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGAGCTTGTAACCTTACGTAAAGGATCACCGATTGAGGCCATCAGCCCTGATGAAAAAATGGCAGCTGTAACTGGTTTCTCCCCATCTAAAGCCAGCCACTTTTCATGGTCACCAGAATTTGGTGATTCATTCACTGCAGAAAATCTTGCAAGGCTCGACACAAGATCCCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATATAATAGCATTGACACCTGAGGAGCTGTCAAGGGCTCCAGCCGAAGTTTTGGGCAGAAGCAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTTTATTATTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATTAAAAAGTTTGCAAACATCAGGCATCCTAATGTTGTCGGACTGAGAGGATATTATTGGGGCCCTACGCAGCACGAGAAGCTTATTCTTTCAGATTATATCTCACTAGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGGAAGAAACGGTCCACCATTAACATGGGCGCAGAGGCTAAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTTCATTTTGATCGCGCTGTTCCTCACGGGAACCTCAAAGCTACAAATGTGTTGCTCGATACCGCTGACATGAATGCACGTGTTGCTGATTACTGCCTTCATCGACTTATGACTCAAGCTGGTACTATGGAACAGATTCTTGATGCAGGGGTGTTAGGTTATCGTTCACCCGAGTTAGCTGCGTCGAAGAAGCCAACACCCTCCTTCAAGTCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTTTAACCGGAAGGTGTGCTGGTGATGTGATATTTGGTGATGAGGGAGGTGTTGATCTGACAGATTGGATAAGGTTGCGTGTATCCGAAGGTCGAGGCTCGGAATGTTTTGATGCTACATTGATGCCAGAAATTAGTAACACTATTGTAGAAAAGGGAATGAAGGAAGTCCTAGGAATAGGCATTAGATGCATTAGGCCTGTTTCTGAAAGGCCAGGAATAAAGACTATATATGAAGATCTTTCTTCTATATAG 3198 0.4146 MKFFSILVLSLSFFSVMGQLPSQDILALLEFKKGIRLDPTGYVLSSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADADLSVFSNLTKLVKLSMSNNSISGKLPDNIGDFKSLQFLDISNNLFSSSLPSGIGNLGSLQNLSLAGNNFSGLIPDTISKMVSIQSLDLSRNSFSGALPASLTKLKSLVSLSLSNNGFTGKIPKGFELMPSLEKLDLHGNMLEGHLDAEFILLSSASYVDFSDNRLISSDSQRQKFLPRISESIKHLNLSHNLLTGTLVSGAEQAIFENLKVLDLSYNNLGGELPGFDFVYDLQVLKLSNNMFSGFIPDGLLKGDSLVLTELDFSANNLSGPLSIITSTTLHFLNLSSNGFTGELPLLTGSCTVLDLSNNNFEGNLTRMVKWGNIEYLDLSVNRLTGSIPEATPQFLRLNYLNLSHNSLSNFLPRVLTQYPKLRVLDISSNQLDGLLLADLLAMPTLQELHLENNMISGSINLSSSTGHSDLRILDLSHNWFNGYFPDQFGSLHGMKVLNIAGNNFSGSLPTAISNMISLESLDISENHFTGPLPNNMPEGLNNFNASQNDLSGVVPEDLRKFPTSSFFPGNAKLHFPNVPPGKTASPPESSKKKHMNTIVKVIIIVSCVVALFILILLAIFIHYIRISRSSPEYDTSKDIHGRAQPIISGPVPVCTSERGGALVVSAEELVTLRKGSPIEAISPDEKMAAVTGFSPSKASHFSWSPEFGDSFTAENLARLDTRSPDRLIGELHFLDDIIALTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISLGSLASFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTMEQILDAGVLGYRSPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVIFGDEGGVDLTDWIRLRVSEGRGSECFDATLMPEISNTIVEKGMKEVLGIGIRCIRPVSERPGIKTIYEDLSSI* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0273 1065 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lan16g0273 1065 SUPERFAMILY Protein kinase-like (PK-like) 786 1061 IPR011009 -
Lan16g0273 1065 Pfam Leucine rich repeat 169 226 IPR001611 GO:0005515
Lan16g0273 1065 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lan16g0273 1065 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Lan16g0273 1065 Gene3D Transferase(Phosphotransferase) domain 1 862 1065 - -
Lan16g0273 1065 Pfam Protein tyrosine and serine/threonine kinase 787 984 IPR001245 GO:0004672|GO:0006468
Lan16g0273 1065 SUPERFAMILY L domain-like 267 594 - -
Lan16g0273 1065 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Lan16g0273 1065 SUPERFAMILY L domain-like 45 380 - -
Lan16g0273 1065 Gene3D Phosphorylase Kinase; domain 1 770 860 - -
Lan16g0273 1065 SMART LRR_typ_2 165 188 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 291 313 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 314 338 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 189 212 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 213 236 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 551 575 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 141 164 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 117 140 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 430 453 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 478 504 IPR003591 -
Lan16g0273 1065 SMART LRR_typ_2 93 116 IPR003591 -
Lan16g0273 1065 Gene3D Ribonuclease Inhibitor 137 261 IPR032675 -
Lan16g0273 1065 ProSiteProfiles Protein kinase domain profile. 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0273 1065 PANTHER OS07G0626500 PROTEIN 2 1065 - -
Lan16g0273 1065 Gene3D Ribonuclease Inhibitor 23 136 IPR032675 -
Lan16g0273 1065 PANTHER - 2 1065 - -
Lan16g0273 1065 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lan16g0273 1065 Gene3D Ribonuclease Inhibitor 262 620 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0273 Lan-Chr16 2164173 2169272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0273 1 1053 Receptor kinase-like Gene Family AT1G55610 26.568 9.27e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan16g0273 PK_Tyr_Ser-Thr 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0273 - - gmx:100793639 1733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0273 16 2164173 2169272 Lan16g0273 16 2164173 2169272 ECH
Lan4g0590 4 8268884 8273917 Lan16g0273 16 2164173 2169272 LSH
Lan19g0782 19 14232797 14244235 Lan16g0273 16 2164173 2169272 LSH