Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0267 ATGGCTTCTTCTTTTTCTTCTTCTACTAGAATTGGTAGTGATGGGAGGGATATTCAACAAGAAGGTTCGAGCTCTCATGGGAGAAAGAGAACTAGGGGTTCTTCTAGTACTTGCGTGCGTCACACTCCTCAGCAAATAGCAAAGCTTGAAGAATTTTTCAAACAGGAGTCTAGTCCAAATGAACACCAAAGAAATCAAATAGCTGAGGAGCTAAAACTTGAGCCAAGACAAATAAAGTTTTGGTTTCAGAATAAGAGGACTAAAAAAAAGGCTGAAATGGAGCGAGAACAGCATGATGCTCTTCGTGCTGAGAATTTTAGGATCCAGATGGAGAGATTCATAATGATTGAACAGTTGAAGACTATAAAATGCTCATCTTGTGGAAACTCATGCTGTCAAAAGTTTGAAAAGCACAAGCATGTGGAGCAACTTAAGCTTGAAAATGCACGCCTAATAGATGAGATTGAGAAGACTCGTAAACTGGTTGAGAGCTACATGGAGAAACCACAGTCACAACCTGAGTTGCAGCTGGACCTTACCTTAGGAATTGGATGTTCAAATGATCCCTCACAAGCAAGTGCTCCAAACATATTAGCAATACAAAGTGTTCCTCAGAATCTAGGTCTATCTTCAGATGAAAATATAATGCCCAAAGCTCAAATGATAGGAGCTGCAATTGCTGCAAAGGAGGAATTACTTGGTCTTTTGACCACTGATGAACCCTTTTGGGTCAAGTCTCGAACCGACAATCAAACACTAATTCTTCATCGTAGAAGCTATGAATGGCTCTTTCCTAGGGTTCCATTGATCAAAAGTTCCAAAACAAGAGAAGAATCATCAAAAGGTTCAAGAATTTTGAGCATGAGTCCAAAGAGATTAGTTGACATGTTTATGGATCCGGGCCTATGGCGCCATCTTTTCTCAACAATTATTTCAAAGGCTCACACAATCCAAGTAGTTGAGACGGGATCCTTAGAAAATCGAAGTGGAGCTGTAGTATTGATGTATGCAGATATGCATGTTCTTTCACCTTTAGTACCATCTAGGGAATTCAACTTCCTTCGCCATTGTGCACAAATTACAGATAGTGTTTGGATTATCACAGATGTTTCTTTTGATTACTTAAAAGAGAAAATCCTTCCTTCACATTCTTGGAGGCTTCCCTCAGGATGTCTAATCAAGGAAATGAATAATGGGTTTACAGAGGTTACTTGGGTGGAGCACGTGGAAGTAGATGACAACATCCAAACACATTCTCTCTACAAAGATGTTGTTAGCACTGGTATTGCATATGGTGCACAAAGATGGCTTTCTGAACTTTCAAGAATGTCTGAGCGATTTTCCAGCTTTGTGCCTAACTACATACCTTCTCATGACACTGGTGCAGTAATTGGTATACCTGAAGGGAGGAAGGGTATAATTAAGGTCTGTCACCGAATGGTGAAAATCTTCTGCGAAATGCTAAACATGTCAAAGTTGCAACAAGTTATAACTAGGAAGACCAATGAAGGGGTTTGGATTTCTTTGAACCAGATGAATATAGAACCTGGCCATGGAAATAGGAGGAGCTTGGTTGCTGCAGCATCCTTTTGGCTCCCAAATCCTTTGAATGATGTTTTTCACTTTTTCATTGATGCAAATAAACGTGCTCAGTGGGATCTTTATTGGCGAGAAAGTAATCCACCCATAGAGCTTTCACGAATCTGTAACAGACAACACTCTGCAAACTTTATATCTGTCTTTCAGGAAAAGAATCCATCTGCCAACCCTAGCGAACGTGTGATCATAATTCAAGAAAATTTTGTGAACCATTTGGGATCATACATTGTATTTTCTCCAATTAAAGAGGGTGACTTAGGTGTGACTTTAAGGGGCCATGATTTATCAATGGTATCTCTTCTACCATCAGGAATCACCATATCTGAAGCTGTATCTACTACAAATGTTGCTGGTTCTGGAGAAGCATCTACTAGTAGAAATCATGGTGGAACAAGAGGTTCATTAGTCACTATAGCTTTGCAAATTCAGATGTCAAATTATATTAACTCAGATTTCATTGAAGGTGCAAACTCTCTAGTGAACTTAACTGTGCAGAGGATAAAGGATGGTTTGAATTTTCATTAA 2124 0.3936 MASSFSSSTRIGSDGRDIQQEGSSSHGRKRTRGSSSTCVRHTPQQIAKLEEFFKQESSPNEHQRNQIAEELKLEPRQIKFWFQNKRTKKKAEMEREQHDALRAENFRIQMERFIMIEQLKTIKCSSCGNSCCQKFEKHKHVEQLKLENARLIDEIEKTRKLVESYMEKPQSQPELQLDLTLGIGCSNDPSQASAPNILAIQSVPQNLGLSSDENIMPKAQMIGAAIAAKEELLGLLTTDEPFWVKSRTDNQTLILHRRSYEWLFPRVPLIKSSKTREESSKGSRILSMSPKRLVDMFMDPGLWRHLFSTIISKAHTIQVVETGSLENRSGAVVLMYADMHVLSPLVPSREFNFLRHCAQITDSVWIITDVSFDYLKEKILPSHSWRLPSGCLIKEMNNGFTEVTWVEHVEVDDNIQTHSLYKDVVSTGIAYGAQRWLSELSRMSERFSSFVPNYIPSHDTGAVIGIPEGRKGIIKVCHRMVKIFCEMLNMSKLQQVITRKTNEGVWISLNQMNIEPGHGNRRSLVAAASFWLPNPLNDVFHFFIDANKRAQWDLYWRESNPPIELSRICNRQHSANFISVFQEKNPSANPSERVIIIQENFVNHLGSYIVFSPIKEGDLGVTLRGHDLSMVSLLPSGITISEAVSTTNVAGSGEASTSRNHGGTRGSLVTIALQIQMSNYINSDFIEGANSLVNLTVQRIKDGLNFH* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0267 707 ProSiteProfiles 'Homeobox' domain profile. 42 92 IPR001356 GO:0003677
Lan16g0267 707 SUPERFAMILY Homeodomain-like 35 96 IPR009057 -
Lan16g0267 707 Coils Coil 141 168 - -
Lan16g0267 707 MobiDBLite consensus disorder prediction 1 20 - -
Lan16g0267 707 MobiDBLite consensus disorder prediction 1 42 - -
Lan16g0267 707 Pfam START domain 226 444 IPR002913 GO:0008289
Lan16g0267 707 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 30 706 - -
Lan16g0267 707 Coils Coil 84 104 - -
Lan16g0267 707 SMART HOX_1 28 96 IPR001356 GO:0003677
Lan16g0267 707 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 30 706 IPR042160 -
Lan16g0267 707 CDD START_ArGLABRA2_like 218 445 - -
Lan16g0267 707 Gene3D - 225 443 IPR023393 -
Lan16g0267 707 Gene3D - 14 98 - -
Lan16g0267 707 SMART START_1 223 446 IPR002913 GO:0008289
Lan16g0267 707 Pfam Homeodomain 40 90 IPR001356 GO:0003677
Lan16g0267 707 SUPERFAMILY Bet v1-like 218 448 - -
Lan16g0267 707 CDD homeodomain 28 90 IPR001356 GO:0003677
Lan16g0267 707 ProSitePatterns 'Homeobox' domain signature. 67 90 IPR017970 GO:0000981|GO:0006355
Lan16g0267 707 ProSiteProfiles START domain profile. 214 449 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0267 Lan-Chr16 2103518 2108421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0267 40 705 Homeobox Transcription Factor Family AT1G73360 39.137 6.67e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan16g0267 START 8.5e-31 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0267 K09338 - gmx:100794552 522.316