Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan16g0259 | ATGATTCTGCAATTTACATTTCACATAATCATTTTGATAATATTGCCTGTATATTCATTATATTCATTTTATCCACCAAATGTGATTATAGCACAGCCTGGTTGTGATTCAACATGTGGCGATGTCTCCATCTCTTATCCATTTGGAATGAAAGATCCAAATTGCTATTTGCACAAGTGGTTTGAGATAGAATGCAGATCCAGTACTTCTAATTCTGGTTATACACCTTACCTTAAATCTCTGAATTTGGAGGTGAGAAACATTGGTTTTGATTATATTATGATAATGAACCCAATCTTCTATTGGAATTGCCATGGTAAAACTAATAAGCCAGTCATAGACCTGAAAGGAAGTCCTTTCAGGTATTCCCAAGCTTATAACACATTTATGGCCTATGGTTGCAACAAACTTGCTTTTTTGCAATCAGATGGGTCAACAATTTGTGGTTGTGTGTCCATTTGTGATCACATTGATGACGTCAGCTTCTATGGAGGCAAAGGTTGCCATGGCATATCCTGCTGCGAGACTTCACTACCTTCGCACCTTTCAGAATATAATGTAACACTTTCAGATATGAATAACGAAAGTAAGACTGATGTGTGTAATCATGCCTTCATTAGTAGTAGTGTTAAAAATGAGTCCCTATATCAGTTGGATAGACATGAACTTGTTTTTGCAGTACTTGAGTGGGAGATTGTTAACGAGGTGATGAGCAATCATTCCAACCAGCTGAATCACTCTTCACATTCCCAATGCTATAACTCAAATATTACTTCTTCCTCACAAAACAAAAACTCATCAGGTTGGCAATGTGGGTGTAATGATGGCTTCGAAGGCAATCCCTATATTTCTGGAAGCTGCACTCGTATGATCCCTCTCCAGCAACTTAGATATACATTAATTATTCAAATTTCACACATCAAAGTTCTACTAATCACCACATAATATTACTCATACACACACTACACTTTTAATCACTTCCTTCTCAATGTTTCAGGTAATAATCATTCTCATTCCAAAAAGTGGGCTATAGAAGGAGTTTCATCAAGCCTTGGATCTGTTATTTTACTCTTTGGTCTATGGTGGTCATATAAAGCTTTAAGGAAAAGAGTGATAAAGAAACGCAAAGAAAAGTTCTTCAAACGAAACGGAGGTTTGTTGTTACAACAAAGATTGTCTACTGAGGAAGTTAGTGTTCACAAAATATTCTTTACCTTAAAGGACATAGAAAGGGCCACCGACAAATTTAATGCGAATAGAGTTCTTGGAAAGGGAGGCCAAGGTACAGTTTACAAAGGCATGCTTGTAGATGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAAGGTTGAAGAATTCATCAACGAGTTTGCTGTTCTTTCACAAATCAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAAAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGCAACCTTTTCGAATATTTGCATGTCGAAAATGAAGACTTGCCAGTGACATGGGATATTCGTTTAAGAATTGCAATAGAAATTGCAGGAGCTCTATTTTACCTACATTCCATTGCATCTCAGCCCATTTACCACAGAGACATCAAATCAACAAATATACTCTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGAACATCAAGAGTAGTTTCCATAGAAGCTACTCATCTTACAACAGTAGTTCAAGGTACTTTTGGTTACTTGGATCCTGAATACTTTCATACAAGTCAATTTACAGATAAAAGTGATGTCTACAGTTTTGGAGTAGTTCTTGCTGAACTTATAACTGGGAAAAGGCCAATATCTGTGTTAAGCTCTGAGGAAGCAAGAAATTTAGCTTCATATTTTGTTCTGTCTATGGAGGAAAATCAGTTGTTTGAGATTATTGACAAAAGGGTAGCAAAGGAATCAGATAAAGAACAGATCAATGCAGTTGCCAATCTTGCATATGCATGCTTAGAGTTGAATGGGAGAAAACGACCAACTATGAAAGAAGTCACATTGGAACTAGAAAGGATACAAGGGGGAGATAGAAGGTTTAATGCAAAGCAAAACTATGAAGAAATAGAGCTTGCAAGAACTCATGAGTACCAACATTTTGATGGATATTCAATGCCTAATACATTGCCCATTATCCACACTGAAATAGTCTCTTCTGAGGTTATGCCTATTCTTAAATCAGATAGTTAG | 2232 | 0.3634 | MILQFTFHIIILIILPVYSLYSFYPPNVIIAQPGCDSTCGDVSISYPFGMKDPNCYLHKWFEIECRSSTSNSGYTPYLKSLNLEVRNIGFDYIMIMNPIFYWNCHGKTNKPVIDLKGSPFRYSQAYNTFMAYGCNKLAFLQSDGSTICGCVSICDHIDDVSFYGGKGCHGISCCETSLPSHLSEYNVTLSDMNNESKTDVCNHAFISSSVKNESLYQLDRHELVFAVLEWEIVNEVMSNHSNQLNHSSHSQCYNSNITSSSQNKNSSGWQCGCNDGFEGNPYISGSCTRMIPLQQLRYTLIIQISHIKVLLITT*YYSYTHYTFNHFLLNVSGNNHSHSKKWAIEGVSSSLGSVILLFGLWWSYKALRKRVIKKRKEKFFKRNGGLLLQQRLSTEEVSVHKIFFTLKDIERATDKFNANRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGKVEEFINEFAVLSQINHRNVVKLLGCCLETKIPLLVYEFIPNGNLFEYLHVENEDLPVTWDIRLRIAIEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRVVSIEATHLTTVVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLAELITGKRPISVLSSEEARNLASYFVLSMEENQLFEIIDKRVAKESDKEQINAVANLAYACLELNGRKRPTMKEVTLELERIQGGDRRFNAKQNYEEIELARTHEYQHFDGYSMPNTLPIIHTEIVSSEVMPILKSDS* | 744 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan16g0259 | 742 | SUPERFAMILY | Protein kinase-like (PK-like) | 395 | 683 | IPR011009 | - | |
Lan16g0259 | 742 | PANTHER | WALL ASSOCIATED KINASE-LIKE PROTEIN | 17 | 737 | - | - | |
Lan16g0259 | 742 | SMART | serkin_6 | 415 | 686 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan16g0259 | 742 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 17 | 737 | IPR045274 | GO:0007166 | |
Lan16g0259 | 742 | CDD | STKc_IRAK | 421 | 686 | - | - | |
Lan16g0259 | 742 | Pfam | Wall-associated receptor kinase galacturonan-binding | 35 | 88 | IPR025287 | GO:0030247 | |
Lan16g0259 | 742 | ProSiteProfiles | Protein kinase domain profile. | 415 | 686 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan16g0259 | 742 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 534 | 546 | IPR008271 | GO:0004672|GO:0006468 | |
Lan16g0259 | 742 | Pfam | Protein kinase domain | 416 | 679 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan16g0259 | 742 | Gene3D | Transferase(Phosphotransferase) domain 1 | 489 | 710 | - | - | |
Lan16g0259 | 742 | Gene3D | Phosphorylase Kinase; domain 1 | 382 | 488 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan16g0259 | Lan-Chr16 | 2040631 | 2043882 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan16g0259 | 35 | 687 | Receptor kinase-like Gene Family | AT1G69730 | 45.202 | 1.09e-180 | 534 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Lan16g0259 | Pkinase | 3.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan16g0259 | - | - | lang:109329470 | 1496.49 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan19g0794 | 19 | 14360347 | 14369231 | Lan16g0259 | 16 | 2040631 | 2043882 | LSH |