Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0259 ATGATTCTGCAATTTACATTTCACATAATCATTTTGATAATATTGCCTGTATATTCATTATATTCATTTTATCCACCAAATGTGATTATAGCACAGCCTGGTTGTGATTCAACATGTGGCGATGTCTCCATCTCTTATCCATTTGGAATGAAAGATCCAAATTGCTATTTGCACAAGTGGTTTGAGATAGAATGCAGATCCAGTACTTCTAATTCTGGTTATACACCTTACCTTAAATCTCTGAATTTGGAGGTGAGAAACATTGGTTTTGATTATATTATGATAATGAACCCAATCTTCTATTGGAATTGCCATGGTAAAACTAATAAGCCAGTCATAGACCTGAAAGGAAGTCCTTTCAGGTATTCCCAAGCTTATAACACATTTATGGCCTATGGTTGCAACAAACTTGCTTTTTTGCAATCAGATGGGTCAACAATTTGTGGTTGTGTGTCCATTTGTGATCACATTGATGACGTCAGCTTCTATGGAGGCAAAGGTTGCCATGGCATATCCTGCTGCGAGACTTCACTACCTTCGCACCTTTCAGAATATAATGTAACACTTTCAGATATGAATAACGAAAGTAAGACTGATGTGTGTAATCATGCCTTCATTAGTAGTAGTGTTAAAAATGAGTCCCTATATCAGTTGGATAGACATGAACTTGTTTTTGCAGTACTTGAGTGGGAGATTGTTAACGAGGTGATGAGCAATCATTCCAACCAGCTGAATCACTCTTCACATTCCCAATGCTATAACTCAAATATTACTTCTTCCTCACAAAACAAAAACTCATCAGGTTGGCAATGTGGGTGTAATGATGGCTTCGAAGGCAATCCCTATATTTCTGGAAGCTGCACTCGTATGATCCCTCTCCAGCAACTTAGATATACATTAATTATTCAAATTTCACACATCAAAGTTCTACTAATCACCACATAATATTACTCATACACACACTACACTTTTAATCACTTCCTTCTCAATGTTTCAGGTAATAATCATTCTCATTCCAAAAAGTGGGCTATAGAAGGAGTTTCATCAAGCCTTGGATCTGTTATTTTACTCTTTGGTCTATGGTGGTCATATAAAGCTTTAAGGAAAAGAGTGATAAAGAAACGCAAAGAAAAGTTCTTCAAACGAAACGGAGGTTTGTTGTTACAACAAAGATTGTCTACTGAGGAAGTTAGTGTTCACAAAATATTCTTTACCTTAAAGGACATAGAAAGGGCCACCGACAAATTTAATGCGAATAGAGTTCTTGGAAAGGGAGGCCAAGGTACAGTTTACAAAGGCATGCTTGTAGATGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAAGGTTGAAGAATTCATCAACGAGTTTGCTGTTCTTTCACAAATCAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAAAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGCAACCTTTTCGAATATTTGCATGTCGAAAATGAAGACTTGCCAGTGACATGGGATATTCGTTTAAGAATTGCAATAGAAATTGCAGGAGCTCTATTTTACCTACATTCCATTGCATCTCAGCCCATTTACCACAGAGACATCAAATCAACAAATATACTCTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGAACATCAAGAGTAGTTTCCATAGAAGCTACTCATCTTACAACAGTAGTTCAAGGTACTTTTGGTTACTTGGATCCTGAATACTTTCATACAAGTCAATTTACAGATAAAAGTGATGTCTACAGTTTTGGAGTAGTTCTTGCTGAACTTATAACTGGGAAAAGGCCAATATCTGTGTTAAGCTCTGAGGAAGCAAGAAATTTAGCTTCATATTTTGTTCTGTCTATGGAGGAAAATCAGTTGTTTGAGATTATTGACAAAAGGGTAGCAAAGGAATCAGATAAAGAACAGATCAATGCAGTTGCCAATCTTGCATATGCATGCTTAGAGTTGAATGGGAGAAAACGACCAACTATGAAAGAAGTCACATTGGAACTAGAAAGGATACAAGGGGGAGATAGAAGGTTTAATGCAAAGCAAAACTATGAAGAAATAGAGCTTGCAAGAACTCATGAGTACCAACATTTTGATGGATATTCAATGCCTAATACATTGCCCATTATCCACACTGAAATAGTCTCTTCTGAGGTTATGCCTATTCTTAAATCAGATAGTTAG 2232 0.3634 MILQFTFHIIILIILPVYSLYSFYPPNVIIAQPGCDSTCGDVSISYPFGMKDPNCYLHKWFEIECRSSTSNSGYTPYLKSLNLEVRNIGFDYIMIMNPIFYWNCHGKTNKPVIDLKGSPFRYSQAYNTFMAYGCNKLAFLQSDGSTICGCVSICDHIDDVSFYGGKGCHGISCCETSLPSHLSEYNVTLSDMNNESKTDVCNHAFISSSVKNESLYQLDRHELVFAVLEWEIVNEVMSNHSNQLNHSSHSQCYNSNITSSSQNKNSSGWQCGCNDGFEGNPYISGSCTRMIPLQQLRYTLIIQISHIKVLLITT*YYSYTHYTFNHFLLNVSGNNHSHSKKWAIEGVSSSLGSVILLFGLWWSYKALRKRVIKKRKEKFFKRNGGLLLQQRLSTEEVSVHKIFFTLKDIERATDKFNANRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGKVEEFINEFAVLSQINHRNVVKLLGCCLETKIPLLVYEFIPNGNLFEYLHVENEDLPVTWDIRLRIAIEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRVVSIEATHLTTVVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLAELITGKRPISVLSSEEARNLASYFVLSMEENQLFEIIDKRVAKESDKEQINAVANLAYACLELNGRKRPTMKEVTLELERIQGGDRRFNAKQNYEEIELARTHEYQHFDGYSMPNTLPIIHTEIVSSEVMPILKSDS* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0259 742 SUPERFAMILY Protein kinase-like (PK-like) 395 683 IPR011009 -
Lan16g0259 742 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 737 - -
Lan16g0259 742 SMART serkin_6 415 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0259 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 737 IPR045274 GO:0007166
Lan16g0259 742 CDD STKc_IRAK 421 686 - -
Lan16g0259 742 Pfam Wall-associated receptor kinase galacturonan-binding 35 88 IPR025287 GO:0030247
Lan16g0259 742 ProSiteProfiles Protein kinase domain profile. 415 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0259 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Lan16g0259 742 Pfam Protein kinase domain 416 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0259 742 Gene3D Transferase(Phosphotransferase) domain 1 489 710 - -
Lan16g0259 742 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0259 Lan-Chr16 2040631 2043882 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0259 35 687 Receptor kinase-like Gene Family AT1G69730 45.202 1.09e-180 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lan16g0259 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0259 - - lang:109329470 1496.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0794 19 14360347 14369231 Lan16g0259 16 2040631 2043882 LSH