Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0257 ATGATTCTGCAATTTACATTTCACATAATCATTTTGATAATATTGCCTGTATATTCATTATATTCATTTTATCCACCAAATTGGATTATAGCACAGCCTGGTTGTGATTCAACATGTGGCGATGTCTCCATCCCTTATCCATTTGGAATGAAAGATCCAAGTTGCTATGTGGACAAGTGGTTTGAGATAGAATGCAGATACTATACACCTTACCTTAAATCTCTGAATTTGGAGGTGAGAGACATTGGTTTTGATTATATTATTGAGATAATGAACCCAGTCTTCTATTGGAATTGCCATGGTAAAACTAATACGTCAGTCATAGACCTGAAAGGAAGTCCTTTCAGGTATTCCCAATATGGTAACAAATTTGTGGCCTATGGTTGCAACAAACTTGCTTTTTTGCAATCAGATGGGTCAACAATTGGTGGTTGTGTGTCCATTTGTGATCACAATGACAAAAGCTTCTATGGTATTGGTTCCAGCGTCATGTCCTGCTGCAAGGCTTCACTACCTTCTCACCTTTCAGAATATAATGTAACACTTTCAGATATGAATAACGAAAGTAAGACTGATGTGTGTAATCATGCCTTCATTAGTAGTAGTGTTAAAAATGAGTCCCTATATCAGTTGGATAGACATGAACTTGTTTTTGCAGTACTTGAGTGGGAGATTGTTAACGAGGTGATGAGCAATCATTCCAACCAGCTGAATCACTCTTCACATTCCCAATGCTATAACTCAAATATTACTTCTTCCTCACAAAACAAAAACTCATCAGGTTGGCAATGTGGGTGTAATGATGGCTTCGAAGGCAATCCCTATATTTCTGGAAGCTGCACTCGTATGATCCCTCTCCAGCAACTTAGATATACATTAATTATTCAAATTTCACACATCAAAGTTCTACTAATCACCACATAATATTACTCATACACACACTACACTTTTAATCACTTCCTTCTCAATGTTTCAGGTAATAATCATTCTCATTCCAAAAAGTGGGCTATAGAAGGAGTTTCATCAAGCCTTGGATCTGTTATTTTACTCTTTGGTCTATGGTGGTCATATAAAGCTTTAAGGAAAAGAGTGATAAAGAAACGCAAAGAAAAGTTCTTCAAACGAAACGGAGGTTTGTTGTTACAACAAAGATTGTCTACTGAGGAAGTTAGTGTTCACAAAATATTCTTTACCTTAAAGGACATAGAAAGGGCCACCGACAAATTTAATGCGAATAGAGTTCTTGGAAAGGGAGGCCAAGGTACAGTTTACAAAGGCATGCTTGTAGATGGTAAAATTGTTGCAGTGAAAAAGTTTAAGGTCCAAGGAAAGGTTGAAGAATTCATCAACGAGTTTGCTGTTCTTTCACAAATCAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAAAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGCAACCTCTTCGAATATTTGCATGTCGAAAATGAAGACTTGCCAGTGACATGGGATATTCGTTTAAGAATTGCAGTAGAAATTGCAGGAGCTCTATTTTACCTACATTCCATTGCATCTCAGCCCATTTATCACAGAGACATCAAATCAACAAATATACTCTTGGATGAAAAGTATAGAGCAAAAGTAGCAGACTTTGGAACATCAAGAGTAGTTTCCATAGAAGCTACTCATCTTACAACAGTAGTTCAAGGTACTTTTGGTTACTTGGATCCTGAATACTTTCATACAAGTCAATTTACAGATAAAAGTGATGTCTACAGTTTTGGAGTAGTTCTTGCTGAACTTATAACTGGGAAAAGGCCAATATCTGTGTTAAGCTCTGAGGAAGCAAGAAATTTAGCTTCATATTTTGTTCTGTCTATGGAGGAAAATCAGTTGTTTGAGATTATTGACAAAAGGGTAGCAAAGGAATCAGATAAAGAACAGATCAATGCAGTTGCCAATCTTGCATATGCATGCTTAGAGTTGAATGGGAGAAAACGACCAACTATGAAAGAAGTCACATTGGAACTAGAAAGGATACAAGGGGGAGATAGAAGGTTTAATGCAAAGCAAAACTATGAAGAAATAGAGCTTGCAAGAACTCATGAGTACCAACATTTTGATGGATATTCAATGCCTAATACATTGCCCATTATCCACACTGAAATAGTCTCTTCTGAGGTTATGCCTATTCTTAAATCAGATAGTTAG 2211 0.3645 MILQFTFHIIILIILPVYSLYSFYPPNWIIAQPGCDSTCGDVSIPYPFGMKDPSCYVDKWFEIECRYYTPYLKSLNLEVRDIGFDYIIEIMNPVFYWNCHGKTNTSVIDLKGSPFRYSQYGNKFVAYGCNKLAFLQSDGSTIGGCVSICDHNDKSFYGIGSSVMSCCKASLPSHLSEYNVTLSDMNNESKTDVCNHAFISSSVKNESLYQLDRHELVFAVLEWEIVNEVMSNHSNQLNHSSHSQCYNSNITSSSQNKNSSGWQCGCNDGFEGNPYISGSCTRMIPLQQLRYTLIIQISHIKVLLITT*YYSYTHYTFNHFLLNVSGNNHSHSKKWAIEGVSSSLGSVILLFGLWWSYKALRKRVIKKRKEKFFKRNGGLLLQQRLSTEEVSVHKIFFTLKDIERATDKFNANRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGKVEEFINEFAVLSQINHRNVVKLLGCCLETKIPLLVYEFIPNGNLFEYLHVENEDLPVTWDIRLRIAVEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRVVSIEATHLTTVVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLAELITGKRPISVLSSEEARNLASYFVLSMEENQLFEIIDKRVAKESDKEQINAVANLAYACLELNGRKRPTMKEVTLELERIQGGDRRFNAKQNYEEIELARTHEYQHFDGYSMPNTLPIIHTEIVSSEVMPILKSDS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0257 735 Pfam Wall-associated receptor kinase galacturonan-binding 35 82 IPR025287 GO:0030247
Lan16g0257 735 Gene3D Transferase(Phosphotransferase) domain 1 482 703 - -
Lan16g0257 735 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 19 730 - -
Lan16g0257 735 CDD STKc_IRAK 414 679 - -
Lan16g0257 735 SMART serkin_6 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0257 735 Pfam Protein kinase domain 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0257 735 Gene3D Phosphorylase Kinase; domain 1 375 481 - -
Lan16g0257 735 ProSiteProfiles Protein kinase domain profile. 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0257 735 SUPERFAMILY Protein kinase-like (PK-like) 388 676 IPR011009 -
Lan16g0257 735 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 730 IPR045274 GO:0007166
Lan16g0257 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0257 Lan-Chr16 2028629 2031729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0257 35 680 Receptor kinase-like Gene Family AT1G69730 44.986 1.87e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lan16g0257 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0257 - - lang:109329470 1400.57