Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0244 ATGTCTTTTTTTGCTGCTATTAGGGGTTATTATAGATGCAGCAGCTCAAAGGGTTGTTCTGCAAGGAAACAAGTTGAGAGGAGTAGGACAGACCCAAACATGTTGGTTATTACTTACACTTCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCCCTAGCTGGTTCATCAAGATCCCAACCATCCAAGAACACAAACCATACTCCAACTTCAAAGAATTCAGAAATCTCTCACAAGGGCATAACAACAACAACAACAAAGCCAAAGGAAGAGCAACAAGAGAGCAACAATAGTGAAGGCAATGTGTCTGTGAAGGAAGAGATAGAAATGGAAGACATAGAGAAGCAGATTGAGATGGATGATGGAGAATTCAGTGATGGACTTTCTTACAAACCATCTATGTTGGAAAATAGTAATAGCCATAATAATCAATCTCATGAGGATTTCTTTGCAGAGTTGGGGGAAATAGAAGCTGACCCATTAAACCTATTGTTTACTCAAGGTTTCAATGATCAGAGGGAATCCAAGGCCTTAGATCCATACCATCTCTTTGATTGGTCAGGAGGAGGCACCACCAACTCATTTGAAGAACCTAATAGTAAGAGAAGGTTATAA 618 0.4013 MSFFAAIRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQPSKNTNHTPTSKNSEISHKGITTTTTKPKEEQQESNNSEGNVSVKEEIEMEDIEKQIEMDDGEFSDGLSYKPSMLENSNSHNNQSHEDFFAELGEIEADPLNLLFTQGFNDQRESKALDPYHLFDWSGGGTTNSFEEPNSKRRL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0244 205 Pfam WRKY DNA -binding domain 8 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0244 205 MobiDBLite consensus disorder prediction 40 104 - -
Lan16g0244 205 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 189 IPR044810 GO:0003700
Lan16g0244 205 SUPERFAMILY WRKY DNA-binding domain 7 48 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0244 205 ProSiteProfiles WRKY domain profile. 8 48 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0244 205 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 8 189 - -
Lan16g0244 205 Gene3D WRKY domain 4 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0244 205 MobiDBLite consensus disorder prediction 40 108 - -
Lan16g0244 205 SMART WRKY_cls 7 47 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0244 Lan-Chr16 1953090 1953761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0244 8 202 WRKY Transcription Factor Family AT1G30650 39.545 2.13e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0244 WRKY 1.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0244 - - lang:109330381 398.667