Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0243 ATGTGCAGTATCTTTGTTCCAATCATGGATAATTACCAAGGTGATTTAACTGATATAGTTCGTGCTAGTACTGGTGGAGCATATAGCACAAGTAGCACAACAACTTCTTCATCTTCACAAGCTGCTATAAATAATCACTTTTCTCATCATCACTGGCAGCATCACTTTTCTTCTGATCCTATCAATTTCTCTTCTTCTGTTTTGGAAGAAGGAGCTAACTTTGGTGATCCATTTTCAACCTTGTTGAGAGATCCATTCTCAAACATGAGAGATCCCTTCTTACATGAGCTTGATATTATGCATAATCAAGGGAATAATTCTTCACCCTACTTCAACACCACAACAACAACAACAAAAAATTCTTCTGCTGAAATTATAAGCACTTCTTGTGGGGCTTTGGAAGATGCAGCACCTTGTTTTGGTGTTAATACTAATACTACTAGTTCTAGTACTTCTGTTTTTGGACACAAGATTCATGAAGATAACAACATCATTAGATCATCAAGGCCTTCTTCTAAGAACATATTCTCAAACATGATTCAGATCTCTCCTAATGCTGCAAAGTTACCTCTCTCACCGTATGATTCTACTTCTCCAAGGGCAATTAAAACTTCTGCTATGGTTTCAGGTAACATGATTAATGCAACAAACACTTCCAAGGATTGCCTTGTTGACAACACAGGAGCAGTTCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCAAAAAAGGTAGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATCAAAGGTTCACCTTATCCAAGGGGTTATTATAGATGCAGCAGCTCAAAGGGTTGTTCTGCAAGGAAACAAGTTGAGAGGAGTAGGACAGACCCAAACATGTTGGTTATTACTTACACTTCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCCCTAGCTGGTTCATCAAGATCCCAACCATCCAAGAACACAAACCATACTCCAACTTCAAAGAATTCAGAAATCTCTCACAAGGGCATAACAACAACAACAACAAAGCCAAAGGAAGAGCAACAAGAGAGCAACAATAGTGAAGGCAATGTGTCTGTGAAGGAAGAGATAGAAATGGAAGACATAGAGAAGCAGATTGAGATGGATGATGGAGAATTCAGTGATGGACTTTCTTACAAACCATCTATGTTGGAAAATAGTAATAGCCATAATAATCAATCTCATGAGGATTTCTTTGCAGAGTTGGGGGAAATAGAAGCTGACCCATTAAACCTATTGTTTACTCAAGGTTTCAATGATCAGAGGGAATCCAAGGCCTTAGATCCATACCATCTCTTTGATTGGTCAGGAGGAGGCACCACCAACTCATTTGAAGAACCTAATAGTAAGAGAAGGTTATAA 1464 0.3948 MCSIFVPIMDNYQGDLTDIVRASTGGAYSTSSTTTSSSSQAAINNHFSHHHWQHHFSSDPINFSSSVLEEGANFGDPFSTLLRDPFSNMRDPFLHELDIMHNQGNNSSPYFNTTTTTTKNSSAEIISTSCGALEDAAPCFGVNTNTTSSSTSVFGHKIHEDNNIIRSSRPSSKNIFSNMIQISPNAAKLPLSPYDSTSPRAIKTSAMVSGNMINATNTSKDCLVDNTGAVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQPSKNTNHTPTSKNSEISHKGITTTTTKPKEEQQESNNSEGNVSVKEEIEMEDIEKQIEMDDGEFSDGLSYKPSMLENSNSHNNQSHEDFFAELGEIEADPLNLLFTQGFNDQRESKALDPYHLFDWSGGGTTNSFEEPNSKRRL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0243 487 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 471 IPR044810 GO:0003700
Lan16g0243 487 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0243 487 Pfam WRKY DNA -binding domain 271 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0243 487 SUPERFAMILY WRKY DNA-binding domain 267 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0243 487 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0243 487 MobiDBLite consensus disorder prediction 313 386 - -
Lan16g0243 487 Gene3D WRKY domain 243 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0243 487 MobiDBLite consensus disorder prediction 294 390 - -
Lan16g0243 487 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0243 Lan-Chr16 1948752 1954454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0243 1 484 WRKY Transcription Factor Family AT1G30650 38.566 1.62e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0243 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0243 - - aprc:113852911 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0606 4 8468424 8472198 Lan16g0243 16 1948752 1954454 LSH
Lan19g0798 19 14469554 14473592 Lan16g0243 16 1948752 1954454 LSH