Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0238 ATGGAAGCTGATGCTGTTACAACCCCACAATTGGCCCTTGCTGATACTGATATCAATTGGAATAGGTTGGATAAGACTAAGTTCCATATTATTGGTGCCATTCTCTTTACTGCTCAATCAGGCTTGCTTCATCCAACAGCAGTGGTAAAGACAAGAATGCAAGTAGCTGGATCCGGACTTTCACAAATGTCGGGAATGTCAGTATTCACTCGCATTTTGAGGAGGGATGGTATTCCTGGAATCTTTAGAGGTTTTGGAACTTCTGCTATTGGATCAATGCCTGGTAGAGTCCTAGCTCTTACATCTCTCGAGATGTCAAAAGACATGATGTTAAAATACACTGAAGGTAAAGATATACCAGAAGCATCGCGTGTTGGTCTTGCAAATGCAGTGGCTGGCATGGTTTCAAATCTGGTCTCTTGTGTGTACTTTGTGCCTTTGGACGTGATCTGCCAGAGGCTAATGGTACAAGGTCTTCCTGGAACTACAAATTGTAGAGGACCATTTGATGTTATCCGTAAAGTTGTGAAAGCTGAGGGTTTCCGTGGCTTGTATAGAGGTTTTGGATTAACAGCTGTATACCAGTCTCCAGCATCTGCACTTTGGTGGGGTTCATATGGCGCAGCACAACACATACTTTGGAGGAGTTTCGGTTACAAAGATGATATGGAGAACAAACCTAAAAATGTGGAAATGGTGATAGTACAGGCTACAGCAGGGATGGTGGCCGGTGCGTGTTCCTCTGTTATTACTACTCCCATTGATACTGTAAAAACACGTCTTCAGGTTATGGATAACTATGGTTCTGGAAGACCATCAGTACTAAAGACAGCGATGACTCTCCTCAAGGAAGATGGATGGTGGGGATTTTACCGTGGGTTTGGACCTCGGTTTTTAAATATGTCACTGTATGGAACAACAATGATTGTTACTTATGAACTGATAAAGAGATTATCAGTGCAACCAAGCTGA 972 0.429 MEADAVTTPQLALADTDINWNRLDKTKFHIIGAILFTAQSGLLHPTAVVKTRMQVAGSGLSQMSGMSVFTRILRRDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDMMLKYTEGKDIPEASRVGLANAVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTNCRGPFDVIRKVVKAEGFRGLYRGFGLTAVYQSPASALWWGSYGAAQHILWRSFGYKDDMENKPKNVEMVIVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTAMTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0238 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 109 IPR018108 -
Lan16g0238 323 PANTHER OS01G0329400 PROTEIN 2 321 - -
Lan16g0238 323 SUPERFAMILY Mitochondrial carrier 21 314 IPR023395 -
Lan16g0238 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 318 IPR018108 -
Lan16g0238 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Lan16g0238 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 321 - -
Lan16g0238 323 Pfam Mitochondrial carrier protein 234 319 IPR018108 -
Lan16g0238 323 Pfam Mitochondrial carrier protein 128 215 IPR018108 -
Lan16g0238 323 Pfam Mitochondrial carrier protein 30 113 IPR018108 -
Lan16g0238 323 Gene3D Mitochondrial carrier domain 19 123 IPR023395 -
Lan16g0238 323 Gene3D Mitochondrial carrier domain 124 321 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0238 Lan-Chr16 1906276 1910206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0238 15 318 Chloroplast and Mitochondria Gene Families AT5G15640 49.020 4.55e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0238 K15121 - jre:109001167 561.222