Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0235 ATGGAAGAGACATTTGTTCCATTTCGCGGAATAAAAAATGATGTTAAACAAAGATTGATGTATTACAAGCAAGATTGGATTGGTGGTATCACAGCAGGATTCAGGATATTAGCCCCTACCACATATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTCGGGGAACAATTGGAGAGAGATACAGATGGAGTACTCACTGCAGTTCAAACATTAGCATCTACGGCATTGTGTGGAATTTTACACTCCGTTATAGGAGGCCAGCCTTTGTTGATTCTTGGAGTAGCAGAACCAACTGTTATTATGTATACATTCATGTTCAACTTTGCTAAAAGTAGACCGGAGTTGGGTTCAAAGCTCTTTCTAGCGTGGTCCGGATGGGTATGCATGTGGACAGCTATCTTGTTGTTCCTGCTGGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCACTCGCCTAGTAGGGGAACTATTCGGCCTTCTTATTGCAATGCTCTTCATGCAAGAGGCTATTAAAGGACTAGTTAATGAGTTTCATATACCCGAGAGAGCAGACCCAACATCAACCGAGTTTCAGTCTTCATGGAGATTCGGAAATGGCATGTTTGCTTTGATTCTATCCTTTGGCCTTCTACTTACAGCATTGAAAAGCCGAAAAGCAAGGTCTTGGCGATATGGTTCAGGATGGTTACGGGGCTTCATAGCAGATTATGGCGTCCCAGTGATGATTATATTATGGACTTCTTTTTCTTATATACCATCTGGAAGTATTCCAAAAGGAATTCCTAGGCGACTCTTCAGTCCAAATCCATGGTCTCCTGGTGCATATGAAAGCTGGACTGTCATAAAGGACATGCTGGATGTGCCAATCCACTACATTTTCGGTGCATTTATTCCGGCGACAATGTTTGCCGTGCTCTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATCGGAGTTCCTCCGTCAAATGGTGTCATTCCACAATCTCCAATGCACACCAAAAGTTTAGCTACATTAAAGCACCTGTTACTTAGAAACCGGCTTGTTGCAACAGCTCGACGTTGTATGAAAAACCAAGCAAGCTTGGGACAAGTATATGGAAGCATGAAAGAAGCTTACTGGCAAATGCAAAGCCCTCTAGTTCACCAAGAATCTTCCTCTCAGGGACTAAACGAGTTGAAAGAGTCTACTATTCAATTGGCATCAAGCATGGGGACTATAAATGGTCCAGTTGATGAGTCAATATTTGATGTTGAGAAGGAAATTGATGACCTATTGCCTGTCGAGGTTAAAGAACAAAGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCTACTTCTGTACTCTGGGGCTATTTCGCTTTCATGGCCATTGAAAACTTACCCGGCAACCAGTTCTGGGAACGGATTTTATTAATGTTCACAGCTCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAAGTTATGTGGAATCTGTACCTTTCAAGACAATTGCAGTCTTTACACTCTTCCAGACTGCATACTTGCTTGTTTGTTTTGGTATCACTTGGGTTCCAATTGCTGGGGTTCTATTCCCATTGATGATCATGCTTCTCGTTCCTGTAAGACAATACATTCTGCCGAAGTTTTTCAAAGGGGTACACCTTCAGGATTTAGATGCTGCAGAATATGAAGTACCTGCTTTACCATTCGATCTAGCTACGGAGAGGAACTTGGGTAAGCCAGCTTCCTTTACAGATGGAGAGATTCTAGATGGAATGATTACAAGAAGCCGGGGCGAGGTTAGACATGTTTGCAGTCCAAAGGTGGTGAACTCCACTGAAACACCATTCACTGAGCTCACTATTCTTCAAAGTCCAAGGCTCCCGGATAAATTACACAGCCCCCGGCTAAGGCCAACGCAGAAGAAATCACAGCCGTCAAAGTGCTAG 2073 0.426 MEETFVPFRGIKNDVKQRLMYYKQDWIGGITAGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGILHSVIGGQPLLILGVAEPTVIMYTFMFNFAKSRPELGSKLFLAWSGWVCMWTAILLFLLAILGACSIINRFTRLVGELFGLLIAMLFMQEAIKGLVNEFHIPERADPTSTEFQSSWRFGNGMFALILSFGLLLTALKSRKARSWRYGSGWLRGFIADYGVPVMIILWTSFSYIPSGSIPKGIPRRLFSPNPWSPGAYESWTVIKDMLDVPIHYIFGAFIPATMFAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGVPPSNGVIPQSPMHTKSLATLKHLLLRNRLVATARRCMKNQASLGQVYGSMKEAYWQMQSPLVHQESSSQGLNELKESTIQLASSMGTINGPVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILLMFTAPSRRYKVLEECHASYVESVPFKTIAVFTLFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGVHLQDLDAAEYEVPALPFDLATERNLGKPASFTDGEILDGMITRSRGEVRHVCSPKVVNSTETPFTELTILQSPRLPDKLHSPRLRPTQKKSQPSKC* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0235 690 MobiDBLite consensus disorder prediction 670 690 - -
Lan16g0235 690 Gene3D Helical hairpin bin 18 60 - -
Lan16g0235 690 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Lan16g0235 690 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Lan16g0235 690 Pfam HCO3- transporter family 201 372 IPR011531 GO:0006820|GO:0016021
Lan16g0235 690 PANTHER ANION EXCHANGE PROTEIN 1 687 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lan16g0235 690 PANTHER BORON TRANSPORTER 3-RELATED 1 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0235 Lan-Chr16 1883285 1888670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0235 1 678 Antiporters AT3G62270 76.496 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0235 K24194 - gmx:100795777 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0805 19 14537224 14542638 Lan16g0235 16 1883285 1888670 LSH