Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0223 ATGAATGCAAACACAAGTATCCTCAACAACAACAATAATAACAAGTTGTTTTTATCTTCAGAGATTGTGGAAGAAGATGCATCTAGCACCATATTTCCCACAACCTTATCAAACGAAATAGCTTCATATGGGTTCATGGAGTTGATAACAGTTCCAGATTATAACTCTCCTTTGTTTGATTGGCTTCCTACGTTAAAAGCAGAGACCGACACAGATGAAGAAATTATCCTTGTCTCCTCCGTGGTGCAGAACACTTCAGTGGTATCATTAACTTCTCCAACTTCAATTAATATCATGAAGGAACAACAACACCATCAAGGAAACAATGCATTAATGTCAAATGGGGTAGTGGAAAGAAGGAACAAAGAAAGGAAGCAAAAAGAACAGAGATATGTAATACATGCAAACACTAATGTGACTAATATAGAAGATGGATTTAAATGGCGCAAGTATGGTCAGAAATATGTGAAAAACAACCATTTTCCCAGGAGTTACTACCGTTGCACCACACTAGGATGTAACGTGAAGAAAAGAGTGGAGCGTTCCTCAGAAGACAATAACTTTGTTATCACCACCTATGAAGGAAACCACACTCACCTTCCACCCAATACTCCAAGGATTATTTCCTTCAACCTCATTCATAATGGTGGCACCATCACCAATAGTAGCGGTGGTGTTGGTTTTCTGCCACCGTCACCACCACCACCACCACAGCAATATCAACATCTTAATCAGCCCATTATTCCTCATCATCATTTTCACCACCCCAATGTGCAACAACAACAACAACAATCAGAACCTTTTTTGTTTAGCACCTTTGTTGAAGGTGATGAGAATCATGGAGGAGAATTTGTAGCATCTAATAACTCTACCCCTCCAATGAGTGATTATATGAACTCAACGTCATCATCTAGTGGCTATGTTGAAGAGCATGAGAACAATGGAGAAGATTTTGGATCCTCTGATGATATATTAATTGATAATGAGGCTTTGTTAAGGAATAATGGGATGCTTGAGGACATTCTTATGTGTCATCTCGGATGA 1044 0.3889 MNANTSILNNNNNNKLFLSSEIVEEDASSTIFPTTLSNEIASYGFMELITVPDYNSPLFDWLPTLKAETDTDEEIILVSSVVQNTSVVSLTSPTSINIMKEQQHHQGNNALMSNGVVERRNKERKQKEQRYVIHANTNVTNIEDGFKWRKYGQKYVKNNHFPRSYYRCTTLGCNVKKRVERSSEDNNFVITTYEGNHTHLPPNTPRIISFNLIHNGGTITNSSGGVGFLPPSPPPPPQQYQHLNQPIIPHHHFHHPNVQQQQQQSEPFLFSTFVEGDENHGGEFVASNNSTPPMSDYMNSTSSSSGYVEEHENNGEDFGSSDDILIDNEALLRNNGMLEDILMCHLG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0223 347 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 97 286 - -
Lan16g0223 347 MobiDBLite consensus disorder prediction 283 321 - -
Lan16g0223 347 MobiDBLite consensus disorder prediction 283 309 - -
Lan16g0223 347 SUPERFAMILY WRKY DNA-binding domain 137 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0223 347 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0223 347 Gene3D WRKY domain 127 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan16g0223 347 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0223 347 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan16g0223 347 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 286 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0223 Lan-Chr16 1763995 1766363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0223 119 228 WRKY Transcription Factor Family AT2G47260 50.893 1.02e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan16g0223 WRKY 7.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0223 - - lang:109329194 593.964