Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0222 ATGGAGGCATCTCTCATCTCAACAACAGACCCCTCACGTGACTCTCACATGCATCACGTGAAGAAAAAGAAACTTCAAAAACATCATAACCATCAACCACAACAACCTACCCATGCAAAATGGAAATCACAGAAACAGCAACAACTTTACTCTTCCAAGCTCCGTCAAGCGCTGACTAGACTCAACCTCGCCGGAAACCACCGTGGGAAACAGGTCCGTGAAGCCGCGGACACGGTCCTCGCCGTCACGGCCAATGGTAAGAGCCGGTGGAGCCGTGCCATCCTCAAAAACAGGCTCAAGCTCAAGTTCAGAAAACAACACAAGAGAAAAAGAGTGGTTATTTCTTCCTCGACCGGGTCCAACCGGTCTAGGAAACAAACCCGGTTCAGTGTGGTTCGATTAAAAGGGAAAACGGTTCCGGTTTTTCAGAGTAAAGTGAAGATTCTGAGCCGGTTGGTTCCGGGTTGCAGAAAAGAACCGTTGCCGGTTATTTTAGAAGAAGCTATTGATTATATACCAGCTCTTGAGATGCAGATTCGAGCCATGACCGCTCTCTCTCAATTACTCTTCGGTTCTTCTTCTTCTTCTTCTGGCGGTGGCGCCACCTCTAGCTCCGCCACTTTTGGCCCTTTATGA 636 0.4858 MEASLISTTDPSRDSHMHHVKKKKLQKHHNHQPQQPTHAKWKSQKQQQLYSSKLRQALTRLNLAGNHRGKQVREAADTVLAVTANGKSRWSRAILKNRLKLKFRKQHKRKRVVISSSTGSNRSRKQTRFSVVRLKGKTVPVFQSKVKILSRLVPGCRKEPLPVILEEAIDYIPALEMQIRAMTALSQLLFGSSSSSSGGGATSSSATFGPL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0222 211 MobiDBLite consensus disorder prediction 17 35 - -
Lan16g0222 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 190 IPR036638 GO:0046983
Lan16g0222 211 MobiDBLite consensus disorder prediction 1 46 - -
Lan16g0222 211 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 16 205 - -
Lan16g0222 211 MobiDBLite consensus disorder prediction 192 211 - -
Lan16g0222 211 CDD bHLH_AtIBH1_like 131 185 IPR044549 GO:0006355
Lan16g0222 211 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 205 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0222 Lan-Chr16 1749073 1749981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0222 40 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 55.000 2.26e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0222 - - gmx:100786088 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0815 19 14653987 14654821 Lan16g0222 16 1749073 1749981 LSH
Lan12g0899 12 15984481 15985614 Lan16g0222 16 1749073 1749981 PCT
Lan16g0222 16 1749073 1749981 Lan12g0899 12 15984481 15985614 PCT