Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0220 ATGGCTTCTTTCTTATCTTTGCATGCTTCAATGTTCATATTTGCAATGATTCTTATTTTCATGATCTTGTGTTGCATGCCATATAGTGCTCTTGGAACTAATGCACAAACTGTTATAGACTCTCCTTTGTTAACACAAAGGTTAGGAATTAATCGCACTATCAAAGTTGATATCAATGGAAAAGGAGACTTTAAATCTGTCCAAGCTGCTATAGATTCCATTCCTGAAGGAAATTCTAATTGGGTCATTGTACATGTTAGGAAAGGAATATACAGAGAAAAGGTGCACATACCAAAGACTAAGCCTTATATATTCATGAGAGGGAATGGAAAAGGAAAAACTTCCATTGTTTGGTCGCAGAGCTCTGAGGATAATGTGGCTTCTGCTACCTTCAAAGCCGAAGCCAAAGATTGCATTATTTTTGGAATTAGCTTCAAGAATGAGGCACCTACAGGAGTTGCATATACCTCACAGAATCAATCAGTTGCAGCATTTGTAGCAGAAGACAAGATAGCATTCTATCATTGTGCATTTTATAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACATTACTATGAGTCATGTTACATTCAAGGCTCAATTGATTTCATATTTGGACGTGGAAGATCAATGTTCTATGGTTGTGAGATGTTTGTGATTGCTGATGAAAGGATAAAAATTCTTGGGTCAATCACAGCACAAAACAGGGAACAAGAGATTGAGATGAGTGGGTTCATCTTTATTAAAGGCAAGGTGTATGGCATTGGTGGGGTGTACTTAGGAAGGGCTAAAGGTCCCTTTTCTAGGATCATTTTTGCTAAGACATACCTCTCTAAGACCATTGTGGCAGAGGGGTGGACCAACTGGAGCTATGATGGCAGCACACAAAATCTATTGATGGGGGAATACAAGACTCATGGACCTGGAGCAGTTATAGAAGGACGTGTTCCTTGGTCAAGACAACTTACTGACCAAGAAGTTGCACCATATTTATCTATCGATTACATTGATGGCAAGAATTGGTTACCAGCATATTGGCAATAA 1050 0.3867 MASFLSLHASMFIFAMILIFMILCCMPYSALGTNAQTVIDSPLLTQRLGINRTIKVDINGKGDFKSVQAAIDSIPEGNSNWVIVHVRKGIYREKVHIPKTKPYIFMRGNGKGKTSIVWSQSSEDNVASATFKAEAKDCIIFGISFKNEAPTGVAYTSQNQSVAAFVAEDKIAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSMFYGCEMFVIADERIKILGSITAQNREQEIEMSGFIFIKGKVYGIGGVYLGRAKGPFSRIIFAKTYLSKTIVAEGWTNWSYDGSTQNLLMGEYKTHGPGAVIEGRVPWSRQLTDQEVAPYLSIDYIDGKNWLPAYWQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0220 349 SUPERFAMILY Pectin lyase-like 50 347 IPR011050 -
Lan16g0220 349 PANTHER PECTINESTERASE 67-RELATED 12 348 - -
Lan16g0220 349 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Lan16g0220 349 Gene3D - 48 348 IPR012334 -
Lan16g0220 349 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
Lan16g0220 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0220 Lan-Chr16 1732257 1735385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0220 1 344 Carbohydrate Esterase AT5G47500 34.072 4.62e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0220 - - mtr:MTR_2g033970 560.451