Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0213 ATGGCGTTTTGGTGGCCCTTGCTTGTTCTAGCATTCGCTTTCGCTATCTGCAAGTTCCTTCTCTTACTCATTCCTCCCAAGGTTCCTTCCATCGACGTTGACACTTCCGATGTGTTGGACGATGGAAATCAAGCATCTGAAAACAGCTTCATATATGTACCTCCGAGGGGAACAGCACAGCAATCAGGGAAGAAAGTTCAGTGCTATGAACCTGCTACCATGAAATATTTGGGATATGTTCCTGCATTGACTCCAGATGAGGTCAGGGAGCAAGTTGAAAAAGTACGAAAGGCACAAAAAATGTGGGCAAAGACCAGTTTCAAGCAAAGACGCCAATTTTTGCGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGCAAGACAATGGTAGATGCATCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAAGTGGCTACTGTCAGAGGGTGAGAAGTGGCTAAAGCCTGAGTTCAGATCCTCAGGATGGTCAATGCTTCATAAGAGAGCCAAAGTAGAGTTTCATCCCCTTGGTGTTGTTGGTGCCATTGTGTCATGGAACTATCCTTTCCACAATATTTTTAACCCGATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATATCGGAACATGCAAGTTGGTCTGGATGCTTTTATTTCCGAATCATACAATCAGCCCTGGCTGCCATCGGAGCTCCAGAGGACCTTGTAGAGGTGATAACAGGGTTTGCTGAAACTGGCGAAGCACTAATATCTTCTGTTGATAAAGTAATATTTGTGGGATCGCCTGGTGTTGGAAAGATGATAATGAGAAGTGCGGCTGACACACTTATACCAGTTACCCTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTTGATGTGGACCATGTTGCTCAAATTGCTGTCAGAGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGAGCTGAACGATTTTATGTCCACAAGAACATTTATTCATCTTTTGTCAGTAAAATTACCAAAATCATAAAATCTGTTACAGCTGGTCCACCTCTTGCTGGAAAATTTGATATGGGAGCTTTATGCATGCATGAACATTCTGAAAAGCTTGAAGGCCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATCATTGCTCGTGGAAGTTTTGGACATATTGGTGAAGACGCAGTTGATCAGTACTTTCCCCCAACTGTGATTGTGAATGTGAATCACTCCATGAGACTGATGCAAGAAGAGGCATTCGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTATCAAGCTCGCAAATGACTCGAAATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCCAGAGAGATAACTTCACAGATAAATTGTGGAGTCGCTGCAGTCAATGATTTTGCAGCAACGTACATGTGTCAGTCCTTGCCATTCGGGGGTGTGAAACACAGTGGATTTGGACGATTTGGTGGTGTGGAAGGTTTGCGAGCATGCTGCTTTGCAAAAGCAGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCAAGATACCCAAACCTATTCAGTATCCTGTAGCAGAAAATGGATTTGAATTTCAGGAGTCACTGGTTGAAGCACTGTATGGGCTCAGCATATGGGATCGTTTGCAGGCATTGGTAAACGTTCTGAAAATGCTAACTGAGCAAAAGTCTATTGGTAGCAGTCATAAGGAGAAATGA 1788 0.4262 MAFWWPLLVLAFAFAICKFLLLLIPPKVPSIDVDTSDVLDDGNQASENSFIYVPPRGTAQQSGKKVQCYEPATMKYLGYVPALTPDEVREQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKIKWLLSEGEKWLKPEFRSSGWSMLHKRAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALISSVDKVIFVGSPGVGKMIMRSAADTLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERFYVHKNIYSSFVSKITKIIKSVTAGPPLAGKFDMGALCMHEHSEKLEGLVNDALDKGAEIIARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGSQSRAREITSQINCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGVEGLRACCFAKAVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQKSIGSSHKEK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0213 595 SUPERFAMILY ALDH-like 60 528 IPR016161 GO:0016491
Lan16g0213 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Lan16g0213 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Lan16g0213 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Lan16g0213 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Lan16g0213 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Lan16g0213 595 CDD ALDH_F15-22 69 531 - -
Lan16g0213 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 522 IPR016162 GO:0016491
Lan16g0213 595 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0213 Lan-Chr16 1675751 1683971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0213 1 587 Aldehyde Dehydrogenase Gene Family AT3G66658 79.898 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0213 - - gmx:100802990 1110.52