Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0202 ATGGGCGCGCCGGAGAAATCACAACCGAATTCTAATTCGATGCAGCGTGTCAAGGTATACCGTCTGAATGATGATGGGAAATGGGATGACCAGGGAACTGGACACGTTACTGTTGATTATCTGGAGCGTTCAGAAGAGCTGGGTTTATTTGTTTATGATGAAGAAGATAATGAGACCATACTTTTGCACCGCATCACTTCTGATGACATTTATAGGAAACAAGAAGATACAATTATATCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTTCAAGAGCCTAGTGGATGCTCTTACATATGGGATCATATTTGCAATGTGCAAAGGAATATGCAGTTTAATAATTTAAATAGTGAGGCATTTCACAGTGTGAATAGCGAGCTAAGGGACTTGCCTGCAGTTGAGCTGTCAACACTTCCCTTAATTCTTAAGACTGTGGTTGAGAGTGGCATTGCAGACCAGTTGCGGCTTACAGAACTAGTATTAAATGATCAAGATTTTCTCCGGAAGCTGGTGGAAGTATTTAGAGTTTGTGAAGACTTGGAAAATATGGATGGCCTTCATATGATTTTCAAAATAGTGAAAGGGATCATTTTGCTGAATAGCACACAAATTTTTGAGAGAATATTCAGTGATGAATTCATAATGGACATTATTGGTTCCCTTGAGTATGATCCGGAGGTTCCTCATTTTAAACATCATCGTAAATTTTTAAAAGAACATGTTATTTTTAAAGAGGCCATACCAATAAAAAATAATCTAGTGCTATCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATATTGTTTTGGCTAGAGTACTGGATGAGGCTACTATTGCAAGTTTTAATTCCATAATACATGCAAACAATGCGACCGTTGTTTCATTATTGAAGGATGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTCAAATCACCCACCACCTCTCTAGAATCGAAGAAAGATATGGTCTATTTCTTGCATGAGTTTTGTAATTTAAGCAAGAACTTACCAATGGTCCAACAGCTTCAGCTTTTTAGGGATCTGACCAATGAAGGCATCTTTGACATTATTACTGATATTTTGCAAAGTGAAGACAAGAAGCTTGTGCTTACTGGAACAGATATCCTCATGCTCTTCTTGAATCAGGATCCTAATCTTCTGAGGTCCTATGTCGTTCGGAAGGAAGGTGTTACTCTTCTAGGACTATTGGTTAAAGGAATGATAACAGATTTTGGAGATGACATGCATTGCCAATTTCTTGAGATTCTTCGCAGTTTATTGGACTCTTGCGCATTGTCTGGAGCAGGAGCACAGAGGGACACTATTATTGACATTTTCTATGAGAAGCATTTGGGTCAACTGATCGAAGTGATAACATCATCTTGTCCTTCAGAAAATGTTGCTTGTGGAAGCAACAAACCAAAAGGTCCTGGCCTAGGAGTTCAGTATCAGAGTGCGACAAAGGCAGAGATACTATCAAATATATGTGAATTACTAAGCTTCTGTGTCCTACATCACCCATACAGGATAAAGTGCAACTTCCTTCTTAATAATGTGATTGATAAAATTTTGTTACTGACACGGAGAAGAGAGAAATACCTTCTTGTTGGTGCTGTCCGGTTTGTTCGTACTATTCTCTCACGCAATGACGAGCATCTGATAAATCATTTTGTTAGAAACAACCTGCTCAAACCAATTGTAGATGCCTTTGTTGCTAATGGCAATCGTTACAATCTGCTAAATTCTGCAGTTCTCGAGCTTTTTGAGTATATTCGGAAGGAGAACCTGAAATTATTACTAAAATATATAGTTGATTCTTTCTGGGACCAGCTTGTTAAATTTGAGTATTTGGTTTCCATTCGCGCACTGAAAGTGAAATATGAGCAGTGTTTGGATAATTTTGGGACAGAAGGTACTGCTAATCTGTCTGATCTTCGAAGACGAATTGATGAACGTGCTCTGGAGAAAGAAGAAGAAGACTACTTTAATGAGGACAGTGATGAGGAGGATACAACTTCTGCATCTGTTTCACATGATAAAAAAGGGCAGCAAAAACAACCTACTATAATCAATGGAGTTGCTGCAAGTTTCTCACAGTTAAGTCCTAGGTCTGGTGGTCTTGTTGACTACGATGATGATGAGGATGATGAAGACTACAGGCCACCGCCAAAGAAGCATCCAGAAACTTCTGAAGATGGTGAAGGGACAATGGAGTCTCTCAGGCTGAAAAGGAAATTGCCTCCAAAGAACAAGGAACCAGAGCTTGTGAAGAAACAGAAGTTGTCTAAAAATTCAAAACCAAAAGATAATGTTTTTGCTGCCTTGTGCTCAACATTGAGTCAGGTCGTGATGCCTGGGAAGAAGACTGCAATCAACATTCATACTGGTCCTTGGAAAATTGATGGGAGGATGAGCCCGAGTGAGGACAATCAAGAAAAGGAGCTGAATGTTGTGAGAAGCGGCTCTGAGAATAGCGACACAGTAGCTGAAGAAAACCATGTAGAGAAAGAGACTGCTGCCTCCAAGTACTATTCTGATAGGTCGCAAGCGACTTCAGATAATGGACAGTTGAGTGGCGAGGAAAATCCTCTAGTTTCACCAAATTCCTCGCCAGAGATGACCGTAAATGGATCATAA 2661 0.3957 MGAPEKSQPNSNSMQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGLFVYDEEDNETILLHRITSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMQFNNLNSEAFHSVNSELRDLPAVELSTLPLILKTVVESGIADQLRLTELVLNDQDFLRKLVEVFRVCEDLENMDGLHMIFKIVKGIILLNSTQIFERIFSDEFIMDIIGSLEYDPEVPHFKHHRKFLKEHVIFKEAIPIKNNLVLSKIHQTYRVGFLKDIVLARVLDEATIASFNSIIHANNATVVSLLKDDNTFIQELFARFKSPTTSLESKKDMVYFLHEFCNLSKNLPMVQQLQLFRDLTNEGIFDIITDILQSEDKKLVLTGTDILMLFLNQDPNLLRSYVVRKEGVTLLGLLVKGMITDFGDDMHCQFLEILRSLLDSCALSGAGAQRDTIIDIFYEKHLGQLIEVITSSCPSENVACGSNKPKGPGLGVQYQSATKAEILSNICELLSFCVLHHPYRIKCNFLLNNVIDKILLLTRRREKYLLVGAVRFVRTILSRNDEHLINHFVRNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKLLLKYIVDSFWDQLVKFEYLVSIRALKVKYEQCLDNFGTEGTANLSDLRRRIDERALEKEEEDYFNEDSDEEDTTSASVSHDKKGQQKQPTIINGVAASFSQLSPRSGGLVDYDDDEDDEDYRPPPKKHPETSEDGEGTMESLRLKRKLPPKNKEPELVKKQKLSKNSKPKDNVFAALCSTLSQVVMPGKKTAINIHTGPWKIDGRMSPSEDNQEKELNVVRSGSENSDTVAEENHVEKETAASKYYSDRSQATSDNGQLSGEENPLVSPNSSPEMTVNGS* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0202 886 MobiDBLite consensus disorder prediction 851 886 - -
Lan16g0202 886 PANTHER ATP SYNTHASE GAMMA-RELATED 1 807 - -
Lan16g0202 886 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Lan16g0202 886 Gene3D - 10 130 IPR011993 -
Lan16g0202 886 MobiDBLite consensus disorder prediction 726 773 - -
Lan16g0202 886 SUPERFAMILY ARM repeat 299 620 IPR016024 -
Lan16g0202 886 PANTHER BINDING PROTEIN-RELATED 1 807 - -
Lan16g0202 886 MobiDBLite consensus disorder prediction 685 711 - -
Lan16g0202 886 Gene3D - 298 616 IPR011989 -
Lan16g0202 886 SUPERFAMILY PH domain-like 15 111 - -
Lan16g0202 886 MobiDBLite consensus disorder prediction 834 850 - -
Lan16g0202 886 MobiDBLite consensus disorder prediction 804 886 - -
Lan16g0202 886 MobiDBLite consensus disorder prediction 664 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0202 Lan-Chr16 1583408 1600020 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0202 K17491 - gmx:100802657 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0632 4 8685703 8689318 Lan16g0202 16 1583408 1600020 LSH
Lan12g0890 12 15924735 15935505 Lan16g0202 16 1583408 1600020 PCT
Lan16g0202 16 1583408 1600020 Lan12g0890 12 15924735 15935505 PCT