Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0195 ATGGGAGTTGAAAAAGAAGGGACAAAAAGTGGAGGAGGATATGTTGGAGGTTTTTTCCAGTTGTTTGACTGGACCTCGAAATCCCGAAAGAAGTTATTTGCAGCCAAGTCTGAGTTACCAGAGCCCTCGAAACATGGAAGAAAAGCTCATTTCAAAGTGGCAATAACACAGCCCTATCTGGCCAATGACGACGATGAGAATGGAATAGCAGCAGGTGTTAGAAGAAGTTGTGATCGTAGTTATGCTTCATCTGTAACAGATGATGAATCATGTGCAACAAGGGCCCCTAGTGTAGTTGCCAGGCTAATGGGATTAGATTCTTTGCCTCCTTCAATTTTTTCTGATCCATATTTTGATACCGGATCCCTTGAAGACACTCAGTACTTTAGCGAAAGCCTCAACCATCAGCATGACCATCAGACCCTATATTCTGGAAAGCTCGTTGAAAAGGCCGAGGGCTCTTCTAGGAACTTCGTGGAGCCAAAGCCTCAAAAGAACCTTACCAGGCCTTTTGAAAAATTCCAAACAGAAGTATTGCCTCCAAGATCAGCTAAGTCAATTCCTGTTACTCATCATAAACTTTTGTCCCCTATTAAGTGTCCTGGCTTTGTTCCATCCAAAAATGCTGCGTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTGGACCTCAAGCTACTACAAAGGCGAAAACACCTCTTGTAGCATCTTCAACAGTATCATTGAGGGTTAAAGATCTTAGGGATAAGGTGGAGGCATCACAAAAAGGACCTCTAATTGGGTCATCTTCGAAGACATCTAGAGCTCGAGATCTAAGAGAAAAAAGAGAAATTTCTCATCGGACGACCAGGAATTCAGAACTTTTTCAAAGACCAGTTGAGTTGCATGATGCCAATTATCAAAAGGGACAATCTTTGAACAAAAGCTGGAATGGTTCCGTGGACACCGTCAAATCATCTACACATGCAGAAGAAGGTTCTTCTTTGAAGAGTAAGGGGAAGTCTATTTCGCTTGCAGTGCAAGCAAAAGTGAATGTTCAAAGAAGAGAAGGTATGAGTTTGAGTGGTGGCAGAAGTTTGGTGAGCCAGAAAGAGCATCTCGAACCAAACCGGACATCAAAGGCGAATGTTCAGAAAAATTTGCATAAGAAATCTTCTGGTGTTCTGAGACAGAATAATCTCAAACAGAATAGTTCAGTTGAAAAAGACAAATTACGATCAAAGCCATTGGTTTCTAATTCACACAGTAAAAAAGTTATGACTGCAGATTCCCCTTATGCACGCCATAGAAGCTCTAATAGTAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAATCGCGGAGATCAGTGATAGCGAAAAGGAAGTTTTATATACAAGTACTAATAATTTTCCGAGAAAGAAAAGGACTACAGACAGGGACTGGAATGATAGGATTGTCGATAATTTGTTCATTGAAAAAATGCCGAAGTCTGTTCAGTCTAGCTTAGTCTGTAATAAACAATATAGTTGGGCTGAAGAAACCAAAAATAAAGACACGGATGTAGTTTCCTTCACATTTACAACACCATTGACACGGAAGAGTCCTGGTTTTGAGACTTCTGGGCAAGCTAGCCAGAAGACTAATGGTCTTTCCTTGGATGAACGAATTAAAGTATTGCTTGACACAGAAAATACAAGGTCTCCTATAGGATACAATGTGATTGGTGGTGATGCATTGGGTATGCTTTTGGAACAAAAGTTGAGGGAATTAACTAATGCAGTTGAGAGCTCTTGTCATGATGTTTCTTGTGTGAAGCAACCTTCCAGTACGGCACCAATATCAAATGATCTAGTTACCCAACTTAATTTAGGTAATACAAGATTGCAACAGAAGAAAGACCAAGATGTGTTGCTTACAGACAATTTAAGCAGTAGCCAGGATTCTGGCATCTCTTTCACTGGTCTTCCAGAATTTTCATCGAAACATAAATCATGGGTTGATGAGATGGATCCACAGTTATTCAATGGCCGACAACCGAGTCCCATATCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCAATGAGCACAGGTGTCACTAGTACAGAAGGAAGCAAGTTGTGCTCATCCGTTCAAGCTCAGGAAGTTCATGGCATGAAACTTTCAAGGAAGTTTTCTCCCGCTGAATCTGATGCAGAGTTATCGGATTCAGCTTCTTCAACATCAACTGGAACCATGATGATAATGAAGCACACAACTACATTTCCAGTCACTAAGTTAGGAAGATCAAGTACATGGGAGTTGGACTATGTGAAAGAAATCTTGTCTAATATTGAATTGATGTATATGGAGTTTTCGTTAGGCCAAGCTCGCGAGGTTACAAACCCTTACCTGTTCAACCAGTTAGAAAGGCGAAAAGGAGGGCTCGAGTTTGACGGCGAGTCTACGATAAGAAGGAAAGTTATATTTGATTGTGTGAGCGAATGTTTGGATATAAGATGCAGGTCCTATGTAAGAGGAGGATACAAAATGTGGGGCAAAGGGGTAGCAATGATGAAAAGAAAAGAATGGTTGGCAGAAGAAGTGTACAAGGAAATTTCGGGTTGGGATTCAATGAAGGATTCAATGGTGGATGAGCTTGTCGAAAAGGACATGAGCAACATATATGGTAGATGGGTAGATTTTGAGGTTGATGGTATTGAACTAGGAGCAGAGATTGTAGATCAAATATTTAATTATTTGGTTGATGATGTTGTTGCTGATATGTTGCAATTGTGA 2775 0.4047 MGVEKEGTKSGGGYVGGFFQLFDWTSKSRKKLFAAKSELPEPSKHGRKAHFKVAITQPYLANDDDENGIAAGVRRSCDRSYASSVTDDESCATRAPSVVARLMGLDSLPPSIFSDPYFDTGSLEDTQYFSESLNHQHDHQTLYSGKLVEKAEGSSRNFVEPKPQKNLTRPFEKFQTEVLPPRSAKSIPVTHHKLLSPIKCPGFVPSKNAAYIMEAAARIIEPGPQATTKAKTPLVASSTVSLRVKDLRDKVEASQKGPLIGSSSKTSRARDLREKREISHRTTRNSELFQRPVELHDANYQKGQSLNKSWNGSVDTVKSSTHAEEGSSLKSKGKSISLAVQAKVNVQRREGMSLSGGRSLVSQKEHLEPNRTSKANVQKNLHKKSSGVLRQNNLKQNSSVEKDKLRSKPLVSNSHSKKVMTADSPYARHRSSNSKSIAKSKVGSRKSIAEISDSEKEVLYTSTNNFPRKKRTTDRDWNDRIVDNLFIEKMPKSVQSSLVCNKQYSWAEETKNKDTDVVSFTFTTPLTRKSPGFETSGQASQKTNGLSLDERIKVLLDTENTRSPIGYNVIGGDALGMLLEQKLRELTNAVESSCHDVSCVKQPSSTAPISNDLVTQLNLGNTRLQQKKDQDVLLTDNLSSSQDSGISFTGLPEFSSKHKSWVDEMDPQLFNGRQPSPISVLEPSFSIESCESSMSTGVTSTEGSKLCSSVQAQEVHGMKLSRKFSPAESDAELSDSASSTSTGTMMIMKHTTTFPVTKLGRSSTWELDYVKEILSNIELMYMEFSLGQAREVTNPYLFNQLERRKGGLEFDGESTIRRKVIFDCVSECLDIRCRSYVRGGYKMWGKGVAMMKRKEWLAEEVYKEISGWDSMKDSMVDELVEKDMSNIYGRWVDFEVDGIELGAEIVDQIFNYLVDDVVADMLQL* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0195 924 MobiDBLite consensus disorder prediction 373 396 - -
Lan16g0195 924 PANTHER EXPRESSED PROTEIN 1 922 - -
Lan16g0195 924 MobiDBLite consensus disorder prediction 349 445 - -
Lan16g0195 924 MobiDBLite consensus disorder prediction 300 334 - -
Lan16g0195 924 MobiDBLite consensus disorder prediction 267 284 - -
Lan16g0195 924 MobiDBLite consensus disorder prediction 253 334 - -
Lan16g0195 924 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 922 - -
Lan16g0195 924 MobiDBLite consensus disorder prediction 412 441 - -
Lan16g0195 924 Pfam Domain of unknown function (DUF4378) 766 916 IPR025486 -
Lan16g0195 924 Pfam DUF761-associated sequence motif 83 111 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0195 Lan-Chr16 1532761 1537674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0195 16 922 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.231 4.35e-93 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0195 - - gmx:102669513 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0195 16 1532761 1537674 Lan19g0863 19 16112762 16117532 LSH
Lan12g0884 12 15882941 15887988 Lan16g0195 16 1532761 1537674 PCT
Lan16g0195 16 1532761 1537674 Lan12g0884 12 15882941 15887988 PCT