Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0189 ATGAGGTTTGATCACTTTAGCATCTTGAAGATTTTGATAATTCTTTCATGTTTTATACATGTTGGTACTTCCTTAGACACAATCTCATCATCCAAAATTCTAAAGGACCCTGAAACTTTAAGCTCCAATGATGGTTTATTCAAGCTAGGATTTTTCACCCCTACAAACTCAACTTTTTCATACCTTGGAATTTGGTATGATATGGCTAAACCCCAAGTTGTTTGGGTAGCCAACAAAGACCATCCACTGAAAAATTCTTCTTCTGGGATGTTCAAAATATATGAGGATGGAAATCTGGTTGTGATGAATGAACAAAATCAGATTCTGTGGTCAACAAATGTGTCTAATGTTTCTGCATCAAACTCCACAACAGCACAACTTCAGAATACAGGGAACCTTGTGTTGCAAGAAAGCACTTCAGGAAGCATGTTATGGCAGAGTTTCCAACACCCTTGTGATACTTTGCTGCAGCAAATGAAACTTACTATGAACAAAAATAACGGCGAGAAAATGGAACTCACCTCATGGAGAAGTCCTCAGGATCCATCTATTGGAGACTTTTTCGCAAGCCTTAACCGGTTAAGTGTCCCTGAAGTGTTCATATGGAGAGGAGAACAACCATACTGGCGAAGTGGACCGTGGAACGGGCAAATCTTTCTTGGGATACCTGATATGAACACGGTTTATCTTCACGGATTTATATTAGGTGGGCAAGATGAAGGAGATGACTCTTATTATATAACCTATACTTATCCAAATAAGTCTGATTTGCTAATATATGTGTTGAGTCCTAAAGGAATTTTACATGAAGTGTATTGGGATTATGAACAGAGTAATTGGCTTGAATCATGGTCATCTCAAAATTCTGAATGTGATGTTTATGGCATGTGTGGAGCATTTGGAAGCTGTGATCATAGTAGTTCACCTATATGTAATTGTTTGAGAGGATTTGAGCCAAGGAATGAAGAAGAGTGGAATAAACAAAACTGGACTAGTGGATGTGTTAGGAAGGAACCTCTTCAGTGTGAGAGAGTCACAAATGGAAGTGAAGCTGGTAAGAGTGATGGGTTTCTGAAGATTCAGAATACCAAAGTTCCGGATTTTACGCAGCGGCTACCTTTTATAGATGATGATTGTAGAACTAAATGTTTGGAAAATTGCTCTTGCATAGCATATGCATATGATTCTTACATAAACTGTATGTGGTGGACTTCAGACTTAATTGATATGCAGAGCCTCTCAAATGGAGGAACTGATCTTTACATTCGGGTTTCGTATTCAGAACTCGATGAAAAGAAGAAGAATACAACAGTGATTGTCACAACTACAGTCATAATAGGAACAATTCTTATTGTGGCTGGTGCATATATCTTGTGGAAAAGGACCACAACAATACAAAAGAAAACAAATCAAGAAATTCAGAAGAGAAACCAGATAAATAGCTTGAGTAATGTTAAACTACAAGAGGTTTCCCAGTATAAGTTTGATAAGCTTGCTATGGCAACGAACAACTTTCACTTAACTAATAAACTCGGAGAAGGGGGTTTTGGACCAGTATACAAGGGTACACTGGAAGATGGACAGGAAATAGCGGTTAAAAGACTTTCAAGAGCATCTGGACAAGGGTTAGAAGAGTTTATGAATGAGGTTATAGTGATATCAAAGCTTCAACATCTTAACCTTGTTAGACTTCTTGGATGTTGCACTGATGGAGATGAAAAGATCTTGATCTATGAGTACATGCCAAACAGAAGTTTGGATGCATATATGTTTGATCCAGTTGGTGAGGTGCTGAATTGGGAAAAACGATTTAAAATACTTGAAGGAATTGCTCGGGGTCTACTTTACCTTCATAGAGACTCTAGACTACGAATTATTCATAGAGATCTGAAGCTAAGTAACATATTGCTAGACGAAGAGTTGAATCCAAAAATATCAGACTTCGGAACAGCAAGAATTTTCGGACGCAGTGAAGATGTTGCCAACACTAATAGGGTTGTTGGAACATATGGTTATATGTCTCCAGAATACGTGATGGAAGGGCTATTTTCAGAGAAGTCTGATGTCTTTAGCTTTGGTGTTTTGCTGCTGGAGATTGTTAGCAGGAGAAAAAATAACAGTTTTTATGAGGATTCTGAATCTTTGAACCTTTTAGGATTTGCATGGAAAATGTGGAATGATGGGAACATTACATCTCTAATAGATCCACAAATATCAAATCCTAGCTTTCATACAGATATCTTAAGATGCATACATATTGGACTTCTGTGTGTACAAGAACTTGCAATAGAGAGGCCTACAATGACTAAAGTGATTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTCCTCCAAAGCAACCAGCTTTCATTCAAAGACAGGTCATGTTGGATGTAGAATCCTCTCACATAAGTGATAGATTATTCTCCATCAATTATGTAAGTTTAACAAAAATCCAAGCAAGATAG 2469 0.3751 MRFDHFSILKILIILSCFIHVGTSLDTISSSKILKDPETLSSNDGLFKLGFFTPTNSTFSYLGIWYDMAKPQVVWVANKDHPLKNSSSGMFKIYEDGNLVVMNEQNQILWSTNVSNVSASNSTTAQLQNTGNLVLQESTSGSMLWQSFQHPCDTLLQQMKLTMNKNNGEKMELTSWRSPQDPSIGDFFASLNRLSVPEVFIWRGEQPYWRSGPWNGQIFLGIPDMNTVYLHGFILGGQDEGDDSYYITYTYPNKSDLLIYVLSPKGILHEVYWDYEQSNWLESWSSQNSECDVYGMCGAFGSCDHSSSPICNCLRGFEPRNEEEWNKQNWTSGCVRKEPLQCERVTNGSEAGKSDGFLKIQNTKVPDFTQRLPFIDDDCRTKCLENCSCIAYAYDSYINCMWWTSDLIDMQSLSNGGTDLYIRVSYSELDEKKKNTTVIVTTTVIIGTILIVAGAYILWKRTTTIQKKTNQEIQKRNQINSLSNVKLQEVSQYKFDKLAMATNNFHLTNKLGEGGFGPVYKGTLEDGQEIAVKRLSRASGQGLEEFMNEVIVISKLQHLNLVRLLGCCTDGDEKILIYEYMPNRSLDAYMFDPVGEVLNWEKRFKILEGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKISDFGTARIFGRSEDVANTNRVVGTYGYMSPEYVMEGLFSEKSDVFSFGVLLLEIVSRRKNNSFYEDSESLNLLGFAWKMWNDGNITSLIDPQISNPSFHTDILRCIHIGLLCVQELAIERPTMTKVISMLNSETVNLPPPKQPAFIQRQVMLDVESSHISDRLFSINYVSLTKIQAR* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0189 822 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Lan16g0189 822 PIRSF SRK 2 822 IPR024171 GO:0004674
Lan16g0189 822 SUPERFAMILY Protein kinase-like (PK-like) 488 775 IPR011009 -
Lan16g0189 822 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Lan16g0189 822 Pfam D-mannose binding lectin 73 177 IPR001480 -
Lan16g0189 822 SMART serkin_6 505 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0189 822 Pfam PAN-like domain 353 410 IPR003609 -
Lan16g0189 822 CDD PAN_AP_plant 339 425 - -
Lan16g0189 822 Pfam Domain of unknown function (DUF3403) 777 822 IPR021820 GO:0004674
Lan16g0189 822 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Lan16g0189 822 ProSiteProfiles Protein kinase domain profile. 505 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0189 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lan16g0189 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 11 803 - -
Lan16g0189 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 216 IPR036426 -
Lan16g0189 822 PANTHER - 11 803 - -
Lan16g0189 822 CDD STKc_IRAK 511 776 - -
Lan16g0189 822 SMART ntp_6 352 424 IPR003609 -
Lan16g0189 822 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Lan16g0189 822 SMART blect_4 31 151 IPR001480 -
Lan16g0189 822 Gene3D - 20 149 IPR036426 -
Lan16g0189 822 CDD B_lectin 31 151 IPR001480 -
Lan16g0189 822 Gene3D Transferase(Phosphotransferase) domain 1 581 782 - -
Lan16g0189 822 Gene3D Phosphorylase Kinase; domain 1 463 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0189 Lan-Chr16 1485369 1488776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0189 424 790 Receptor kinase-like Gene Family AT4G23230 50.674 3.41e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan16g0189 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0189 - - adu:107468469 1078.54