Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0181 ATGTGTGGGGGAGCTATCATCTCTGACTTCATTGGTGTGAAGCGTGGCCGGAACTTGGTTACCCACCAAGACCTATGGGCTGAGCTTGACCCTCTCTCTGATCTCCTTGGCTTTGATGCCACCAACCCTACTTCTAAGGACCAACAACCACCACCCTTCTACTTTGATCATAAGCCACCTCAAATCCCACAAACCAAAGAATCTGACAAGGAAAAGAAGAAAAACTTGAAGGTTGTTGCCATAAACAATGAGTATTCTCATGAAGAAGCTCCTAAGGGCATGGCTAAGGGTAAGGTTCGGAAGAATGTGTATAGAGGAATAAGGCAAAGGTCATGGGGAAAATGGGCAGCTGAGATTAGGGATCCTTATAAGGGTGTCCGTGTCTGGCTTGGCACCTTCAACACCGCCGAGGAAGCCGCTGCGGCCTACGATAAAGCCGCCATTCGCATCCGCGGTGACAAGGCCAAGCTCAACTTCCCTTCTCCGCCTCCAGCTAAGAAACGTTGCATCAACCATGATACTGTTGGTGAGGGTTTTGACCTAAAGCAACAAATCTCAGACCTTGAATGGTTCCTTGAGTTGGAGAATGAACAACCTATGCAGCAGTTCAATAGTGTTGACAATAATAACAGCAACAACATGGATCTTTGGATGCTGGAAGACATCGTTATGTCCAATCCTAACTTTGTTTACTAG 696 0.4698 MCGGAIISDFIGVKRGRNLVTHQDLWAELDPLSDLLGFDATNPTSKDQQPPPFYFDHKPPQIPQTKESDKEKKKNLKVVAINNEYSHEEAPKGMAKGKVRKNVYRGIRQRSWGKWAAEIRDPYKGVRVWLGTFNTAEEAAAAYDKAAIRIRGDKAKLNFPSPPPAKKRCINHDTVGEGFDLKQQISDLEWFLELENEQPMQQFNSVDNNNSNNMDLWMLEDIVMSNPNFVY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0181 231 MobiDBLite consensus disorder prediction 39 73 - -
Lan16g0181 231 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Lan16g0181 231 PANTHER EREBP TRANSCRIPTION FACTOR 1 180 - -
Lan16g0181 231 Gene3D AP2/ERF domain 103 161 IPR036955 GO:0003700|GO:0006355
Lan16g0181 231 PANTHER DNA-BINDING DOMAIN 1 180 IPR044808 GO:0003700|GO:0009873
Lan16g0181 231 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Lan16g0181 231 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Lan16g0181 231 SUPERFAMILY DNA-binding domain 103 160 IPR016177 GO:0003677
Lan16g0181 231 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Lan16g0181 231 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
Lan16g0181 231 CDD AP2 104 160 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0181 Lan-Chr16 1426033 1427851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0181 1 225 AP2-EREBP Transcription Factor Family AT3G16770 41.637 5.85e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan16g0181 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0181 K09286 - gmx:100817253 210.69