Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0167 ATGAATATTCATAACAACAACCATGCAAATTATGAAGGGATTCTTGAGAATGTATGGGCTAAAATCATCAATAGTGATGGAGCAGATAGAAGAGGAAATGAAGTAGCAGAATCTTCTAGTTCATGGGAAGAATTGCATAATCTTTATGGAAGAGATAGGTCTATGGAAATGCTTCAGAGACTACCAAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTTTGGGAAGAAGTTTTAGATGGTATTATACCAACTACAACAAATACTGAAAATTCTTATAGCCATAACAATTTGGAAACTACTAGTGCTACTAAATCCAATAAAAAGTTAGAAGATGGTGTGAGAAAAGAGAAGAAAATAGTTGCAAAACACTATAGGGGAGTAAGGAGAAGACCATGGGGAAAATATGCAGCAGAGATTAGAGACTCTTCTAAGAAAGGTGCAAGAGTTTGGCTTGGGACATTTGACACAGCTGAAGAAGCAGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTCCTAAATCATACCTAAATTTCTCACTTAAGACAGTTTCAAAGGCTTTAGGGTTTACTTGTGAAGAGGGTTGCTATGCATGCAGATATGTTGGGAACAAAGAAAATTGTTACAACTCAAGGAAGAGAAGATCACAGGATGGTGAAAAAATTGTTGATATGCTGATTATGAATGAAGAACCTGCATTGAAAAAGGTGGCAACATTGGAAGGTGTGTTAGAAAATGAAATAGATGTTGTATTTCAAGACCTAGGTAGTGATTACTTTGACAATTTGCTATCTTCTTTTTAA 810 0.3543 MNIHNNNHANYEGILENVWAKIINSDGADRRGNEVAESSSSWEELHNLYGRDRSMEMLQRLPSLGRWISMGADFWEEVLDGIIPTTTNTENSYSHNNLETTSATKSNKKLEDGVRKEKKIVAKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKSYLNFSLKTVSKALGFTCEEGCYACRYVGNKENCYNSRKRRSQDGEKIVDMLIMNEEPALKKVATLEGVLENEIDVVFQDLGSDYFDNLLSSF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0167 269 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Lan16g0167 269 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Lan16g0167 269 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Lan16g0167 269 CDD AP2 123 181 IPR001471 GO:0003700|GO:0006355
Lan16g0167 269 SUPERFAMILY DNA-binding domain 124 183 IPR016177 GO:0003677
Lan16g0167 269 MobiDBLite consensus disorder prediction 89 111 - -
Lan16g0167 269 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Lan16g0167 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 16 269 - -
Lan16g0167 269 MobiDBLite consensus disorder prediction 89 104 - -
Lan16g0167 269 Gene3D AP2/ERF domain 123 184 IPR036955 GO:0003700|GO:0006355
Lan16g0167 269 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 269 - -
Lan16g0167 269 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0167 Lan-Chr16 1295337 1296146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0167 14 269 AP2-EREBP Transcription Factor Family AT4G18450 36.656 1.16e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan16g0167 AP2 3.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0167 - - lang:109334345 407.142