Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0164 ATGGAACAACAAGATAGAGTGTTTTTTCTTATGATGTTTCTTCTTTTCCAAGTTATGCTTGTAGCAGCACAAACATCAAGTCAAGACTTTTCTGGGCTGCAATCTCTCACACAATCCTGGACTAACAAACCACCAAATTGGGTGGGTTCAGATCCTTGTGGCGGTAATTGGGACGGAATTATTTGCACCAATTCAAGAATTACCCAATTGAAACTATCAGGCTTGGCATTGTTAGGCCAGCTATCCTCAACAATTCAATCATTATCTGAACTAGACACAGTGGATCTTTCTTACAACACTGGCTTCACAGGAACAATTCCGAAAGAAATTGGGAATTTGACAAAGCTAAAATCCCTTGCATTGGTTGGTTGTGGTTTCTATGGTCCTATTCCAGATTCAATAGGATCTTTAAAGCAGCTCACATTTCTAGCGCTGAATTCTAATCGGTTCAACGGAAGTATTCCACACAGCATCGGCAATCTATCCAACCTTAATTGGCTAGATCTTTCTGATAATCAGCTCGGAGGACCTATTCCTGTCTCTGATGACCAAGGACAACTAGGTCTTGACCTGCTTCTCAAGACACAACACTTTCATATGGGCGACAATAAGCTCTCTGGTCATATACCACCGAAACTTTTCAACTCCAGTATGAATCTAGTACATGTGCTTTTCTATGGTAATCAACTAGTTGGTACTATTCCAAGCACTCTCAGTCTTGTGAGCACAGTGGAGGTTGTGCGCTTCGATCGGAATGGATTAACTGGGGAAGTGCCTTCAAACTTCAACAATCTAGGACAACTTAGTGAGCTGTATTTATCTGACAACAAATTCAATGGCTCTCTGCCGGATCTTTCGGGAATGAATAGTCTCACCTATGTGGATATGAGCAACAATAGTTTCACTTCTTCAGATAATATTCCTTCATGGGTTACAAGTTTAGAAATCCTGACAACAGCGATGCTAGGGGACAATCAGCTCAGTGGCACATTTAATATCAGCAATGGATACAGCACTAGTCTGCAACTCATTAATTTGCAGAATAATGCAATAACCGATTACAAGCCGGGAAACCAAAATATAAATTTTGAAGTGATTCTTGCTGGCAATCCATTTTGTCTTGAAAATGGAGTTTCTCAACAAAGTTACTGCAAAGTTTCGACAGTAATTCCATCATATTCAACACCTGCAAATAATTGTTCACCTCAAACATGCAGTAACAGTCAGATTTCAAGCCCAAACTGTAAATGTGCATATCCATATACAGGAAGTCTGATTTCTAGAGCTCTTAGTATCTCAATCTTCAATACAAGTTACTACCAGGATATTGAGAAGTCTCTGTTGAATAGTTTTCGAGCCCAAAATCTTCCCGTGGATTCAGTTTCTCTCAGTGATCCAATGAAGAATTCATCTAATGAGAATTTTCAGTTTACTCTCAGTGTCTTCCCATCTCAAACTGATCGTTTCAATAGAAGTGGAGTCTCACAAATTGCTTTTGTGCTAAGCAACCAAATCTACAAAGCCCCGGAGTTCTTCTCCCCTTACTTCTTCATTGGTGGCGATTACGGATACTATGGAGGTGAACCGAAAAAATCGAGCTCAGTACACACGGGTGTTATAGTTGGTGCAGTACTTGCTGTTGTGGCCTTTCTAGTACTAGCAGTCATTGCAGGGATGTATGCCATCAGACAAAAAAGAAGAGCACAAAGAATGAAAGAGCAAAACCCTTTTGTTAATTGGGAACAGAACAAGGATAATGGCATTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGACGAGTTAAGGAGATACACCAACAACTTCGCCGAAGCCAATACTATTGGATCTGGTGGCTATGGACAGGTTTACCAAGGTGTTCTTCCCGCTGGGGAATTAGTTGCAATCAAACGGGCTGCAAAACAATCCATGCAGGGTGCTGCAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTGTCGGTTTCTGTTTTGAGAAGGGTGAACAAATGTTGGTGTATGAGTACATTCCAAATGGCACTTTAATGGATAGTCTTACAGGAAAGTCCGGGATCTGGATGGATTGGATAAGGAGGCTGAAAGTAACATTGGGTTCAGCCAAGGGTCTAACCTATCTTCATGAACTTGCTAACCCACCAATCATACACAGAGACATAAAATCAGGCAATATCCTACTTGATAGTCACCTCAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTGCTGATAGTGATGTTGGTCATGTCACTACTCAAGTCAAAGGAACAATGGGTTACTTGGATCCTGAATATTACATGACTCAGCAGTTGACTGAAAAAAGTGATGTATATAGCTTTGGAGTATTGATGCTGGAACTAGTAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTTTATTGTAAGAGAGGTAAATAGAATAATGGATACATCAAAAGATTTATACAACCTTCATTCCATTCTAGACCCAACAATAATTAAAGAAACAAAACCAAAAGGTTTAGAAAAGTTTGTGGAATTGGCATTGAAGTGTGTCAAAGAACATGCACATGATAGGCCTTCAATGGCTGATGTTGTAAAAGAGGTTGAGAACATAATAGAGCATGTTGGTTTGAATCCTAATTCTGAATCAGCTTCAACATCAGAAGCCTATGATGTAGAGAAAGGAGGTAATATATTACATCCTTATAGCAATGAAGATTTTAACTATAGTGGAATTTTCCCATCAACAAAGGTAGAACCTCATTGA 2799 0.3969 MEQQDRVFFLMMFLLFQVMLVAAQTSSQDFSGLQSLTQSWTNKPPNWVGSDPCGGNWDGIICTNSRITQLKLSGLALLGQLSSTIQSLSELDTVDLSYNTGFTGTIPKEIGNLTKLKSLALVGCGFYGPIPDSIGSLKQLTFLALNSNRFNGSIPHSIGNLSNLNWLDLSDNQLGGPIPVSDDQGQLGLDLLLKTQHFHMGDNKLSGHIPPKLFNSSMNLVHVLFYGNQLVGTIPSTLSLVSTVEVVRFDRNGLTGEVPSNFNNLGQLSELYLSDNKFNGSLPDLSGMNSLTYVDMSNNSFTSSDNIPSWVTSLEILTTAMLGDNQLSGTFNISNGYSTSLQLINLQNNAITDYKPGNQNINFEVILAGNPFCLENGVSQQSYCKVSTVIPSYSTPANNCSPQTCSNSQISSPNCKCAYPYTGSLISRALSISIFNTSYYQDIEKSLLNSFRAQNLPVDSVSLSDPMKNSSNENFQFTLSVFPSQTDRFNRSGVSQIAFVLSNQIYKAPEFFSPYFFIGGDYGYYGGEPKKSSSVHTGVIVGAVLAVVAFLVLAVIAGMYAIRQKRRAQRMKEQNPFVNWEQNKDNGIAPQLKGARWFSFDELRRYTNNFAEANTIGSGGYGQVYQGVLPAGELVAIKRAAKQSMQGAAEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLTGKSGIWMDWIRRLKVTLGSAKGLTYLHELANPPIIHRDIKSGNILLDSHLNAKVADFGLSKLLADSDVGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEQGKFIVREVNRIMDTSKDLYNLHSILDPTIIKETKPKGLEKFVELALKCVKEHAHDRPSMADVVKEVENIIEHVGLNPNSESASTSEAYDVEKGGNILHPYSNEDFNYSGIFPSTKVEPH* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0164 932 SMART serkin_6 610 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0164 932 Gene3D Ribonuclease Inhibitor 18 186 IPR032675 -
Lan16g0164 932 SUPERFAMILY Protein kinase-like (PK-like) 596 889 IPR011009 -
Lan16g0164 932 ProSiteProfiles Protein kinase domain profile. 610 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0164 932 Gene3D Ribonuclease Inhibitor 187 413 IPR032675 -
Lan16g0164 932 Pfam Protein kinase domain 612 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0164 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Lan16g0164 932 Gene3D Transferase(Phosphotransferase) domain 1 686 904 - -
Lan16g0164 932 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 906 - -
Lan16g0164 932 PANTHER RECEPTOR-LIKE PROTEIN 55 2 906 - -
Lan16g0164 932 SUPERFAMILY L domain-like 33 373 - -
Lan16g0164 932 Gene3D Phosphorylase Kinase; domain 1 580 685 - -
Lan16g0164 932 ProSitePatterns Protein kinases ATP-binding region signature. 616 642 IPR017441 GO:0005524
Lan16g0164 932 CDD STKc_IRAK 616 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0164 Lan-Chr16 1268118 1274193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0164 1 932 Receptor kinase-like Gene Family AT5G49760 51.875 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan16g0164 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0164 - - gmx:100786172 1316.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0664 4 9197860 9204284 Lan16g0164 16 1268118 1274193 LSH
Lan19g0900 19 16406316 16412974 Lan16g0164 16 1268118 1274193 LSH