Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0119 ATGGGTTTTAAGAATTTGGAGTTGCATGTCCGAGTCTTTGTTTTCTACATGCTGATTCTCACTACAACTTTCTGTGTTGGGGACACTGACATTGTTGATGTTGCAACAATCAATAGTTTATATGTTGCTCTAGGCTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAACTGTGGGAAGGTGTTGCTTGTGTCTTCTCCAACATAACTGCCTTACACCTCGGAAGCATGAATTTGAGTGGAGAGCTGGGAAGTAATTTGGATTTCCCATCCATCTTAGAAATCGACCTTAGCAACAACCGTATTGGAGGGCCCATTCCATTTACTTTGCCACCGACTCTGAGGATCTTGTCTCTGTCAGGAAATCAGTTAAACGGAAGCATTCCGGATGGTTTTTCCTTATTAACTGAATTGTCAAACCTGGATTTGTCAAGCAACAACTTGAGTGGTCAGCTGCCTTCCTCAACGGGAAGTTTATCATCTCTTACCACATTACACTTGCAGAACAATCAACTTTCTGGAATTCTCGATGTTTTGCAGGACCTGCCTCTTCAGGATCTGGATATAGAGAATAATTTATTCTCTGGGCCAATTCCTCCAAAATTGTTGTCTATTCCAAATTTCAGAAAAGATGGGAATCCATTTAATACTACTATTATTCCATCACCTCCGGCTCCTGCACCAACCCCTTCACCAGCTCCTTCACCTTTAGCTATGGCTCCATCGCCAGGTGGATCGCCTTGGAGAGCGGCAACGAGTCCATCTACCATAGCACCAGTGCAAGCAAGTGCTAGGAAATCTTCCATACCAAAGCGTGTCATTTGGATTGCTGGTGCAGGTTTTTTAATATTGGTTGCATTAGGAGCTTGTCTTTTTATGTTGTGGAGCTTTAAGAGGTCAAAGAAGAAAAATGACAAGAAAAATGATAAGAAACATGATGCAGTTTACGAAGCAACTAATCAAGTGGAGAAAGGTGAGAAACCATCACTTGTATATGAGGTACAAAATAAAAGAACGAGTTTGATTCCGAAGATTCAAGGTGAACAAGAAATATCTTTGAAAATAGTATCTGCAACTTCTGAAAGTAATGATGGTGGGATTGGAGGCAGTTCTAAACTTCCATCCCTGCAGCCACCTCCAAGTCCTCCCACAAATATTCCTGCCGAGGTCATCTTCAATCCGCCTATACCTTCCAAAGCAACTGAAGGACATGGTTCTATAATGGCTTATACTGTCGCATTACTTCAGCAGTATACAAATAGCTTTTCCCAAGAAAACTATATCGGGGAAGGCACACTCGGACCTGTTTACAGGGCTGAGCTCCCTGATGGAAAGCTGTTGGCAGTGAGGAAACTGGATGCTACTGCTTCCATAGGGCAGGATCATGAACAATTTCTTCAATTAGTGTCTAGCATCTCAAAAATTCAGCACTCTAATATTGTGAAGTTCATGGGTTACTGTGCTGAGTATAACCAACGATTACTTGTATACGAGTATTGCAATAATAGGACTCTATATGATGCACTGCACGGGGATGATGAACACCATGTAGAACTTCCATGGAATGCACGCATTTCTGTGGCACTTGGAGCTGCGAGAGCGTTAGAGTATCTTCATGAGAACTTCCGGCCACCTATCGTCCATCGAAATTTTAGGTCGGCTAATATTCTCCTGAATGACAAGCTGGAAGTCTATGTCTCTGATTGTGGATTAGGTCCTTTACTATCTTCCGGCTCTGCTGGTCAGTTGTCAGGACGTCTCCTCACAGCTTACGGTTACAATGCACCAGAAGTTGTTTCCGGAAGTTATACACAACAAAGTGATGTTTTCAGTTTTGGAGTTGTGATGCTAGAACTTATCACTGGACGAAAATCCTACGATAGGTCACTATCTCTTAGAGAGCAATTTTTGGTGAGATGGGCAGTCCCTCAACTACATGACATTGATGCATTGTCAAAAATGGTTGACCCCAACTTAAACGGTGAATATCCGATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCCTCATGCGTACAGAATGAACCTGAATTCCGGCCAGAAATGTCCGAAATTGTTCAAGATCTATTGCGAATGATGTAG 2118 0.4263 MGFKNLELHVRVFVFYMLILTTTFCVGDTDIVDVATINSLYVALGSPPLQGWKPVGGDPCFELWEGVACVFSNITALHLGSMNLSGELGSNLDFPSILEIDLSNNRIGGPIPFTLPPTLRILSLSGNQLNGSIPDGFSLLTELSNLDLSSNNLSGQLPSSTGSLSSLTTLHLQNNQLSGILDVLQDLPLQDLDIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAPAPTPSPAPSPLAMAPSPGGSPWRAATSPSTIAPVQASARKSSIPKRVIWIAGAGFLILVALGACLFMLWSFKRSKKKNDKKNDKKHDAVYEATNQVEKGEKPSLVYEVQNKRTSLIPKIQGEQEISLKIVSATSESNDGGIGGSSKLPSLQPPPSPPTNIPAEVIFNPPIPSKATEGHGSIMAYTVALLQQYTNSFSQENYIGEGTLGPVYRAELPDGKLLAVRKLDATASIGQDHEQFLQLVSSISKIQHSNIVKFMGYCAEYNQRLLVYEYCNNRTLYDALHGDDEHHVELPWNARISVALGAARALEYLHENFRPPIVHRNFRSANILLNDKLEVYVSDCGLGPLLSSGSAGQLSGRLLTAYGYNAPEVVSGSYTQQSDVFSFGVVMLELITGRKSYDRSLSLREQFLVRWAVPQLHDIDALSKMVDPNLNGEYPMKSLSRFADIVSSCVQNEPEFRPEMSEIVQDLLRMM* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0119 705 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Lan16g0119 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 135 705 - -
Lan16g0119 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 8 146 - -
Lan16g0119 705 SUPERFAMILY Protein kinase-like (PK-like) 409 701 IPR011009 -
Lan16g0119 705 MobiDBLite consensus disorder prediction 226 246 - -
Lan16g0119 705 MobiDBLite consensus disorder prediction 367 388 - -
Lan16g0119 705 Gene3D Phosphorylase Kinase; domain 1 402 504 - -
Lan16g0119 705 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Lan16g0119 705 ProSiteProfiles Protein kinase domain profile. 427 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0119 705 Pfam Protein tyrosine and serine/threonine kinase 430 701 IPR001245 GO:0004672|GO:0006468
Lan16g0119 705 Gene3D Ribonuclease Inhibitor 36 228 IPR032675 -
Lan16g0119 705 MobiDBLite consensus disorder prediction 226 258 - -
Lan16g0119 705 Gene3D Transferase(Phosphotransferase) domain 1 505 704 - -
Lan16g0119 705 SUPERFAMILY L domain-like 44 212 - -
Lan16g0119 705 PANTHER LEUCINE RICH REPEAT KINASE 2 8 146 - -
Lan16g0119 705 PANTHER LEUCINE RICH REPEAT KINASE 2 135 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0119 Lan-Chr16 932605 996232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0119 19 705 Strubbelig Receptor Gene Family AT4G03390 49.801 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan16g0119 PK_Tyr_Ser-Thr 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0119 - - ahf:112783685 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0963 19 17008854 17015021 Lan16g0119 16 932605 996232 LSH