Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0111 ATGCCCAACTTCACTATTCTAAACCGTTTCTCTTCATCTTTTCGTGACTATAACTCTCATCTCAAACTTGTATTCATCTGCACCACTGTAAGTGGTGGTGGTGTTTTGGGATACAATGCGGTGGTTGGTTCATCTGAAGATGCCGTAGTCGCCGCTGCAGATAAGAAAAAGGTGGTGGTGCTTGGAACAGGATGGGCTGCTACAAGTTTCATGAAGAATCTAAACAATCCAAAATATGATGTTCAAGTTGTATCACCTCGTAACTATTTTGCATTCACTCCTTTACTTCCTAGTGTTACTTGTGGCACTGTTGAAGCTCGTAGCATTGTTGAACCAGTTCGAAATATTTTTCCTAAGAAAAATGTGGAAGTTCAATTCAGTGAAGCTGAATGTATCAAGATTGATGCCGAAAACAAGAAAGTTTACTGTCGATCGATTTCGAAGAATAATTTGAATGGTCAGGAAGAATTTGCTGTGGATTATGACATCTTAATCATATCAGTTGGAGCTAATGTCAACACATTTAATACACCAGGAGTTGTAGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCAGAGAAGATTAGAAGAACAGTTATTGACTGTTTTGAGAGGGCAAGTTTACCTGATATAAGTGAAGAAGAGAGGAAGAGAATTCTTCACTTTGCTATTGTTGGAGGTGGTCCTACTGGAGTGGAATTTGCAGCAGCACTTCATGATTTTGTCAATGGAGATTTGGTCAAATTATACCCTGGGATTAAAGATTTAGTTCAAATTACACTTCTAGAGGCAGGGAATCATATTTTGAGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGACAAGTTCCAAAGAGAAGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAAGTAACCAATAAAGAAATTTGCACAAAAGAAGTGACGAATGGAGGCCAAATCAGTTCCATTCCATATGGAATGGCTGTATGGTCAACTGGCATCGGCACTCGTCCATTCATTAAAGATTTCATGTCACAAATTGGTCAGGGTAATAGGCGTGCTCTACTTACCGATGAATGGTTGAGAGTTGAGGGATTCAATGATGTATATGCACTTGGTGATTGTGCTACTGTAAACCAGCGAAAAGTCGTGGAAGATATTGCAGCCATATTTAAGAAGGCTGACAAAAATAATTCCGGAACACTAACGGTCAAAGAATTTCAAGAGGTTATGGGTGACATCTATGAAAGATACCCTCAAGTGGAGCTATATCTGAAGAACAAACAGATGAGCAACATTGCTGATTTATTAAAGGAAGACAATGTTGATGTTAAAAAACAGCTGAATATTGAAGAACTAAAAAAAGTACTTTCCAAAGTGGATTCTCAGATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGTATTTACCTGGCCAAGTGTTTTAACCGGATGGAAGATTGCGAAGAGAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAACATTTAGGCCAATTTGCTCCTTTGGGAGGAGAGAAAACAGCAGCACAGCTTCCTGGTGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTTTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGTTGGCGCACACGGGCGCTAGTTGTTACAGATTGGACAAGGCGTTTCGTTTTCGGGAGGGATTCAAGTCGCATCTGA 1737 0.4036 MPNFTILNRFSSSFRDYNSHLKLVFICTTVSGGGVLGYNAVVGSSEDAVVAAADKKKVVVLGTGWAATSFMKNLNNPKYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFPKKNVEVQFSEAECIKIDAENKKVYCRSISKNNLNGQEEFAVDYDILIISVGANVNTFNTPGVVENCHFLKEVEDAEKIRRTVIDCFERASLPDISEEERKRILHFAIVGGGPTGVEFAAALHDFVNGDLVKLYPGIKDLVQITLLEAGNHILSMFDKRITAFAEDKFQREGIDVKTGSMVVKVTNKEICTKEVTNGGQISSIPYGMAVWSTGIGTRPFIKDFMSQIGQGNRRALLTDEWLRVEGFNDVYALGDCATVNQRKVVEDIAAIFKKADKNNSGTLTVKEFQEVMGDIYERYPQVELYLKNKQMSNIADLLKEDNVDVKKQLNIEELKKVLSKVDSQMKFLPATAQVASQQGIYLAKCFNRMEDCEENPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEKTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVTDWTRRFVFGRDSSRI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0111 578 Pfam EF hand 384 409 IPR002048 GO:0005509
Lan16g0111 578 PANTHER NAD(P)H DEHYDROGENASE B2 4 578 - -
Lan16g0111 578 SUPERFAMILY EF-hand 372 465 IPR011992 -
Lan16g0111 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Lan16g0111 578 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Lan16g0111 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Lan16g0111 578 Gene3D - 48 414 - -
Lan16g0111 578 Gene3D - 419 577 - -
Lan16g0111 578 PANTHER NADH DEHYDROGENASE 4 578 IPR045024 GO:0003954|GO:0006116
Lan16g0111 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Lan16g0111 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lan16g0111 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Lan16g0111 578 SUPERFAMILY FAD/NAD(P)-binding domain 222 376 IPR036188 -
Lan16g0111 578 SMART efh_1 383 411 IPR002048 GO:0005509
Lan16g0111 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 380 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0111 Lan-Chr16 861828 866211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0111 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 71.184 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0111 K03885 - gmx:100797657 963.37