Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0108 ATGGATAACTCAAGCATTATTGCATCAACAAATTCAACAGATAAATCATTAATATGTTATACACCAGCTATGACAACAACAAATGGATTATGGGATGGTGATAACCCTTTAGAATATTCTCTTCCTTTATTCATTCTACAATTAACCTTAGTTGTTCTTTCTACACGTTTCTTTGTCTTCATTCTCAAGCCATTTCATCAACCTCGTGTCATTGGTGAAATCATGGGTGGGCTATTGTTGGGGCCATCAGTGCTGGGAAGAAATGAAGAATTTGCCTCTAAAGTATTCCCTCTAAAAAGTGTGATGGTGATAGAGACAATGGCAAGCATAGGTCTAATATATTTCCTGTTCCTAGTTGGGTTAGAGATGGACATTGCTGTTGTCAAAAGAACCGGAAAAAAGGCGGTGTCAATAGCCATTGCTGGAATGATATTGCCCTTTATCCTTGGTATTTTCTTCTCTTTTTTCTTAGATGAACACCATTTACATATGAGCAGAGCCAGTGTTGTACTCTACATTGGTGTTGCTTTATCCGTAACTGCGTTCCCTGTGCTCGCTCGCATACTCGCTGAGCTAAAGATCATAAACACAGAACTTGGCAAGCTTGCACTCTCAACTGCTCTAATCAATGATATGTGTGCATGGATTTTGCTGGCTCTAGCTATTGCCTTATCTGAGAAGAATAGTGTTAACACATGGGCTTCAGTTTGGGTTGTGTTAACAAGTGGTGTTTTCGCTACGTTTTGCTTCGTTGTTGTTAGGCCTGGAATCTCATGGATGATAAGGAGAACACCAGAAGGACAACCTTTCAGTGAGTTCCAAATATGCTTTGTACTCACTGGTGTTATGATCTCAGCCTTCATTACAGATGTTATTGGAACACATTCTGTTTTCGGAGCTTTTATATATGGCCTTGTAATTCCAAATGGTCCACTTGGAGCTACTATAATAGAAAAACTTGAAGACTTTGTTTCAGGGCTTTTACTACCTCTCTTTTTCGCCCTTAGCGGCCTTAAGACTGATATCAGCTTAGTTAAAGGTGCAAATAGATGGTTTGGTGCACTCATGGTGGTTCCTCTTGCTTGTCTTGGCAAGGTCATCGGAACTGTACTTATTTCGTTGCTTTTCCAGATACCAACTCGTGAAGGTATTATCCTTGGTTTACTTATGAACACTAAAGGCCTTGTTGAGATGATTGTGCTCAATGTTGGGAGGGAACAAAAGGTCTTGGGTGATGAAACATTTTCAATTATGGTGATTGTAACACTTGTAATGACAGCACTTATTTCACCCATTGTAACATTGATTTATAAGCCAAGGAAAAGGCTCATACCTTACAAAAAAAGAACAATGCAAAATTCAAAACTTGATGCAGAGTTAAGAGTGCTAGTGTGTGTTCATGTTCCTAGAAATGTCCCTACAATAATAAATCTCCTTGAAGCAACTCACCCAAGCAAAAAGTCTCCAATTTGTGCTTATGTGCTCCACTTAGTTGAACTCACTGGTAGAGCTTCTGCCATGCTCATTGTCCATGCCAGTAGAAAATCCGACCGACCAGCCCTCAACAAAACACAAGCACAAACAGACCACATCATCAATTCATTTCAGAACTTTGAGGAGCAAATTGGTTATGTCTCAGTCCAACCCTTAACAGCAGTTTCACCTTACTCTACAATGCATGAAGACGTATGCAACTTGGCCGAAGAGAAAAGAGTATCCATCATCATAATTCCTTTCCACAAGCAACAAACAGTTGATGGAGAAATGCAAGAAACAAATCCAGCATACAGAATGGTGAACCATAATCTAGTACAGAATTCTCCTTGCTCAGTTGGGATACTTGTTGATAGAGGCCTAAACGGATTGAACCGATTAACCGCGAGCCTCGCATCACACGAGATAACCGTGTTATACTTCGGAGGACCAGATGATAGGGAGGCACTATCCTATGGATGGAGAATGTCAAGGAATCCAAGGGTTCATCTCACAGTCATGCATTTTATTCCAGGGATTGATGCAAAAACAGTGACACTAGCAAAAGAAGTAGATGATGAAAGAGAAATGGGTATAAACTATAACAATGGAAGTGTAAAAGAGAAAAGACTAAATGAGGAGTATATAAATGAGTTCAAGATTATGTGTGAAAATGATGAGTCAGTTGAATACATAGAGAAAGTTGTGAATAATGGAGAGGAAACAGTATCAGCAATAAGATCAATGAACAATGTGAATGATTTGTTTATAGTTGGTAGAGGACAAGGTTCAACATCATCAGCAACACTAACAGAAGGACTAACAGATTGGAGTGAGTGTCCAGAACTTGGTGCAATTGGAGATTTGTTGGCTTCATCAGATTTTGAAACATCAGCATCAGTATTAGTGATGCATCAATATATAGGAGAAGGGCCTGAAGGAGAAGAGATTTATGTATCTGATAAACCATGGCATTCAAATGAAAACCATCCTTCTGTAAGACACATGTCAATGGCAACAAGATATGCACCAATGCCAATGCCAATGGCCAATCATCTATTTTAA 2538 0.3928 MDNSSIIASTNSTDKSLICYTPAMTTTNGLWDGDNPLEYSLPLFILQLTLVVLSTRFFVFILKPFHQPRVIGEIMGGLLLGPSVLGRNEEFASKVFPLKSVMVIETMASIGLIYFLFLVGLEMDIAVVKRTGKKAVSIAIAGMILPFILGIFFSFFLDEHHLHMSRASVVLYIGVALSVTAFPVLARILAELKIINTELGKLALSTALINDMCAWILLALAIALSEKNSVNTWASVWVVLTSGVFATFCFVVVRPGISWMIRRTPEGQPFSEFQICFVLTGVMISAFITDVIGTHSVFGAFIYGLVIPNGPLGATIIEKLEDFVSGLLLPLFFALSGLKTDISLVKGANRWFGALMVVPLACLGKVIGTVLISLLFQIPTREGIILGLLMNTKGLVEMIVLNVGREQKVLGDETFSIMVIVTLVMTALISPIVTLIYKPRKRLIPYKKRTMQNSKLDAELRVLVCVHVPRNVPTIINLLEATHPSKKSPICAYVLHLVELTGRASAMLIVHASRKSDRPALNKTQAQTDHIINSFQNFEEQIGYVSVQPLTAVSPYSTMHEDVCNLAEEKRVSIIIIPFHKQQTVDGEMQETNPAYRMVNHNLVQNSPCSVGILVDRGLNGLNRLTASLASHEITVLYFGGPDDREALSYGWRMSRNPRVHLTVMHFIPGIDAKTVTLAKEVDDEREMGINYNNGSVKEKRLNEEYINEFKIMCENDESVEYIEKVVNNGEETVSAIRSMNNVNDLFIVGRGQGSTSSATLTEGLTDWSECPELGAIGDLLASSDFETSASVLVMHQYIGEGPEGEEIYVSDKPWHSNENHPSVRHMSMATRYAPMPMPMANHLF* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0108 845 PANTHER CATION/H + ANTIPORTER 12 833 - -
Lan16g0108 845 PANTHER CATION/H+ EXCHANGER 3 12 833 - -
Lan16g0108 845 Gene3D - 43 443 IPR038770 -
Lan16g0108 845 Pfam Sodium/hydrogen exchanger family 50 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0108 Lan-Chr16 835684 839464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0108 12 820 Antiporter Super Family AT2G13620 65.142 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0108 - - gmx:100800514 1223.76