Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan16g0107 | ATGGAGTTTGATCTTGAAGACCCTTTTGCCAGCTTCAAAGAACACCAAAACTGTATTGTATCACAACTCTTTGCATCAGAATCTGATCATATGCCCTTCACAAACTCCTTAACTGCAACACATTCTCACCTTTCGTTACGCTGCGACGCAGTTTCTTTCATACTTCAGGTCCAATTTTCATGCAATTTGGAGCCTTCTGTAACTTATCTTGCTATAAACTACTTGCACCGTTTCATGTCCAGGCAAGAAATTCCGCAGGGGAAGCCTTGGTTACTTAGGCTTGTTGCCATATCCTGTCTTTCTCTTGCTTCAAAGATGAAGAACACTCGGTTTTCGCTTTCGGATATTCAGAAACAAGGTTATGTTTTGGAGGCTCAATGTGTTCAGAAAATGGAGCTTCTAATTCTTGGTGCACTGAACTGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGCATTTCTTCATCTCTTTATCTGAATTCAAAGATCAAGCACTGAAGGAAGCACTTAAAGAAAGAGCTTCTGAGATAATCTTCAATGCTCAAAATGAGTTTAAGATTTTAGAGTACAAACCTTCAACTATTGCAGCATGTGCCCTTATGTCTGCATCTCATGAACTATCCCCGGCGCAATATTCTATTCTGAGAGTTTCAATTACATCTTGTGAGTATATAGATGAGGAGACATTATCCAAGTGCTTTAATTTGATACAAGAGATGGTGAATATGGAAACAAATGAGTCAATGATGGATACAACTACAAGCTTTTTAAGCACTGAAACTCCCATCAAAGGGCAGAGAATTTGA | 807 | 0.3903 | MEFDLEDPFASFKEHQNCIVSQLFASESDHMPFTNSLTATHSHLSLRCDAVSFILQVQFSCNLEPSVTYLAINYLHRFMSRQEIPQGKPWLLRLVAISCLSLASKMKNTRFSLSDIQKQGYVLEAQCVQKMELLILGALNWRMRSITPFPFLHFFISLSEFKDQALKEALKERASEIIFNAQNEFKILEYKPSTIAACALMSASHELSPAQYSILRVSITSCEYIDEETLSKCFNLIQEMVNMETNESMMDTTTSFLSTETPIKGQRI* | 269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan16g0107 | 268 | CDD | CYCLIN | 46 | 136 | IPR013763 | - | |
| Lan16g0107 | 268 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 5 | 259 | - | - | |
| Lan16g0107 | 268 | Gene3D | - | 22 | 235 | - | - | |
| Lan16g0107 | 268 | SUPERFAMILY | Cyclin-like | 12 | 143 | IPR036915 | - | |
| Lan16g0107 | 268 | SMART | cyclin_7 | 52 | 137 | IPR013763 | - | |
| Lan16g0107 | 268 | Pfam | Cyclin, C-terminal domain | 146 | 249 | IPR004367 | - | |
| Lan16g0107 | 268 | PANTHER | CYCLINS | 5 | 259 | IPR039361 | - | |
| Lan16g0107 | 268 | Pfam | Cyclin, N-terminal domain | 21 | 143 | IPR006671 | - | |
| Lan16g0107 | 268 | SUPERFAMILY | Cyclin-like | 127 | 239 | IPR036915 | - | |
| Lan16g0107 | 268 | Gene3D | - | 33 | 144 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan16g0107 | Lan-Chr16 | 829077 | 830905 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan16g0107 | 1 | 260 | Core Cell Cycle Gene Families | AT4G03270 | 40.364 | 3.27e-61 | 193 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan16g0107 | K18812 | - | gmx:100799985 | 361.303 |