Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0102 ATGGCTGAGGAGTTTCTTCAAGTTGGTGAAAACTGGTGGAGTATTAATGGAACAAGAAGTGTGTTCCCTCTTATGAGTTCATCATCAACATGTTCAGTGGCTGCTAATGATGCAGGGAACTATAGCACATGGCAAACTAATTTCTTGGATTTGAAGCCAACAAGATCTTGTGTTGAGGACACTAATCACAATAATTTGGTTTCTGATGATTCTTTTGGTTTTCTTGATGCTCACAAGCCACAACAACATAGTGAATCAGCAACAGGTAGTGGAAATGGTAGCATATTGATGGATTCTACCACCATACAAATGATGGGTTTTGGCTTGTCCTCTTCAACTTCATTGAATTGGAATCAATCTATATTTCATAGTAGTGGAAGCCAAGAGAGCAATTTTTATTCTATGACACAAGAACCAGGTATAGATTCTTCTAATAACTCACAAATCCAAAAGGAATGGAGCTCAAATAAATCACAAACCACAGTTAATGCCCCAATGAACCACGAATTTTGCATAGATCAACAAGGTCTGAGTTCTGTAACTAGCAGTGACCAATCATGTGGTTTCCCAATAGAGTCAACAAGCACCTATGGTTACCCTTCAAATTTGACACAAAGCTTATATGAACCTGCTTATCCTCAACCACAACCACATAACTCACTTTTCAACAACCCATCTACTATGTCCTACTCATCTGCACCAAACTATGGGACATCTTCTTCCAATGAATTGTCACCAACAACATGGTCTAAAGTCCCTAATTCTTTTGCACAAAAGGAGCAGCTTAGTAGTGGATTGCACTTTTCCAACAATACTCCTTTCTGGAATGCTTCAGCTGAGGCACTGAATGACATAAGAGTAGGTGCTTTTGCTTCATCACAAGCACAATATCAAACACCAACTTTTGAAGACAAACCCATCTCCCAAAGTACTCTATTGAACAAGGTCAAGGAAGATGATAAATCTTCAAACACAATATCAGTGGGGAAGAAGAGTGGTTGTGAACCAGATTTCAAGAGGCCAAGAATTGAAACTCCATCACCATTGCCAACTTTTAAGGTTAGAAAAGAGAAGCTAGGGGACCGTATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACAGATACAGCATCTGTTCTTCATGAAGCCATAGACTACATCAAGTTCCTTCATGATCAAGTCAGTGTTTTGAGCACTTCATATCTAAAAAATAAAGAATCTCCCATCCAAAACCAACAGGGTTGTGATAATATGAACGACTCTGAAGGTCAAAACCAAGATTTAAGAAGCCGAGGGCTATGTTTGGTACCAATTTCAAGCACATTCCCTGTTACTAATGAGACCACCATTGATTTCTGGACTCCTACATTTGGAGGCGCATTCAACAGCAGCTAG 1401 0.3954 MAEEFLQVGENWWSINGTRSVFPLMSSSSTCSVAANDAGNYSTWQTNFLDLKPTRSCVEDTNHNNLVSDDSFGFLDAHKPQQHSESATGSGNGSILMDSTTIQMMGFGLSSSTSLNWNQSIFHSSGSQESNFYSMTQEPGIDSSNNSQIQKEWSSNKSQTTVNAPMNHEFCIDQQGLSSVTSSDQSCGFPIESTSTYGYPSNLTQSLYEPAYPQPQPHNSLFNNPSTMSYSSAPNYGTSSSNELSPTTWSKVPNSFAQKEQLSSGLHFSNNTPFWNASAEALNDIRVGAFASSQAQYQTPTFEDKPISQSTLLNKVKEDDKSSNTISVGKKSGCEPDFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHDQVSVLSTSYLKNKESPIQNQQGCDNMNDSEGQNQDLRSRGLCLVPISSTFPVTNETTIDFWTPTFGGAFNSS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0102 466 MobiDBLite consensus disorder prediction 321 349 - -
Lan16g0102 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 343 392 IPR011598 GO:0046983
Lan16g0102 466 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 454 - -
Lan16g0102 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 353 406 IPR036638 GO:0046983
Lan16g0102 466 MobiDBLite consensus disorder prediction 131 158 - -
Lan16g0102 466 Gene3D - 353 415 IPR036638 GO:0046983
Lan16g0102 466 CDD bHLH_AtbHLH_like 349 400 IPR045239 -
Lan16g0102 466 PANTHER TRANSCRIPTION FACTOR BHLH123 31 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0102 Lan-Chr16 795491 804788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0102 1 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.235 8.88e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0102 - - lang:109333637 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0999 19 17310488 17321263 Lan16g0102 16 795491 804788 LSH