Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0100 ATGCTTTCGAAGCCTCCCATGGCTTCTCGCAACCAGAACAGGCCTCCTCGCAGCCCCTCTAATAGAAAGGTAGGTACAGGAGAAGTTCCTTCAGACAAGCGTAGAAGGATTGTTGGGGCACGAGGAAGGGCTCCACTCGGTGCAATGAGCAACAAGCCAGATGATGTTGCTAATACCGAAGGCTCCGAATGTGGCGCTGTTGTTGACTTCACAACTGAGGAAGTTGAGGCACTGCTCAATCAAAGAATGAAAAAGGGGAATTCTTATGATAAGAAAGAAATGGATCACAGGGCAGATCTTGTTAAGAGTTTAAAGCTTTGCGTTAGGTGGTATAAAAGGGTTGAAGAAGGTTATATCCAGGAAAAGGAAAAGCTCCAGATTGAACTTCAATCTGCTGAGAAGAAGTGCATTGATGCTGAGACTGAGATGAAGAATAAGATAGAGGAGTTGAATGAGACTATATCTAATCTGAGGATGACAATTTCCTCTTTAGAAAAGAGAATTACCAAGGAAGAATCAGATAAATTGGAAGCAATAGATTGTTATAGAAAAGAAAAGGAAGCTAGAGGTTTGGCTGAGCAGATGCAAGCTTCTCTTTCAACCGAGCTTGAGAAAGTTCGAGATGAGAAATCAGCTGCTGAACGGAAGGCTAATTCAAATGACGATTTGTATAAGAGATCACAAGAGTATAACATGAGTCTACAGCAGTACAACAGTCGCCTTCAGTCAGATCTAGAAACAACTAATGAGGCTCACAAGCGACTGGAAACAGAGAAAGCGACCATTGTTGAGAATCTTAGCAATGTAAGAGCCCACAATAAAGCATTGCAGGATCAGTTAGTATCTTTTAAGGTTTCACAAGATGAGGCTTCAAAGCAGAAAGAGATGTTGGTAAACGATCTGAATTGCCTCCGGGAAGAATTAAAACAAATTAGAGACGACCGTGATCGCCAATTGGGACAAGTGCAAGCTTTAAGTGGAGAATTAACAAAATACAAAGAATATACAGGGAAATCAGTTGCCCAATTGGATACATTGACAATTAAAACAAATGCTCTTGAGGAGACATGTTCTTATCAGAGGGATGAAATACTTAAGCTGCAGCAACAATTGACTGCTGAAAAGGATAAGTCAAAGATGGCTAATTTATCTGCTTCAGAAACTAGAATAGTGTTTGAAGATCAGCAAAGAATCATACATGAATTACAAGAAAGATTGGCAGATAAAGAATTCCAAGTAATTGAAGGAGAGAAATTGAGGAAAAAGTTGCACAACACTATCCTGGAGCTAAAAGGCAATATTCGTGTGTTTTGTCGTGTGCGACCTTTGCTACCGGATGATTCTACTGGAACGGATATGGTTGTTTCTTACCCTACGTCAACAGAAGATCTTGGCCGGGGCATTGAATTGCTACAAAGTGGGCAGAAGTATCCATTTACATTTGACAAGGTATTCAATCATGACGCTTCTCAGCAAGATGTTTTCACAGAGATTTCACAGCTGGTACAAAGTGCGCTAGATGGGTACAAGGTCTGTATATTTGCTTATGGGCAGACAGGTTCAGGCAAGACATACACGATGATGGGTAGACCTAATGCTTCAGATCTGAAAGGGTTGATACCACGTTCTTTGGAACAAATTTTCCAGATTAGCCAGTCCCTTGAAGATCAAGGGTGGAAGTACAAAATGCAGGCTTCAATACTGGAAATATATAATGAGACTATCAGGGACTTGTTGGCAAATAGGTCAGGTGGTATTGACCCAACACGTACAGAAAATGGTGTTCCTGGAAAGCAGTATACTATTAAACATGATGCTAACGGAAACACACATGTTACAGACCTCACTGTAGTGGATGTTTGTAGTGTAAATGAGATTTCCTCTCTCCTGCAAAAGGCTGCACAAAGCAGGTCGGTAGGAAGAACACAGATGAACGAACAGTCTTCACGAAGCCACTTTGTCTTTACTTTGCGTATATGCGGGACTAATGAGATCACTGGACAACAGGTTCAAGGGGTGCTAAATTTGATTGATCTTGCTGGAAGTGAGAGACTCTCAAGGAGTGGGGCAACTGGGGACCGTTTGAAGGAAGCTCAGGCTATCAACAAAAGTCTTTCCTCTTTGAGTGATGTCATATTTGCATTGGCAAGGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAACTGACATACCTTCTTCAGCCATGCCTTGGTGGGGATTCTAAAACTCTGATGTTTGTGAACATCTCACCTGATCCATCTTCAACCGGCGAGTCACTTTGTTCCCTTCGATTTGCTGCCAGAGTGAACTCATGTGAGATTGGCATCCCAAGGCGTCAGACATCCACGAAGTCCTTTGATTCTTCTCGTTTGAGCTATGGCTAA 2385 0.4193 MLSKPPMASRNQNRPPRSPSNRKVGTGEVPSDKRRRIVGARGRAPLGAMSNKPDDVANTEGSECGAVVDFTTEEVEALLNQRMKKGNSYDKKEMDHRADLVKSLKLCVRWYKRVEEGYIQEKEKLQIELQSAEKKCIDAETEMKNKIEELNETISNLRMTISSLEKRITKEESDKLEAIDCYRKEKEARGLAEQMQASLSTELEKVRDEKSAAERKANSNDDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKATIVENLSNVRAHNKALQDQLVSFKVSQDEASKQKEMLVNDLNCLREELKQIRDDRDRQLGQVQALSGELTKYKEYTGKSVAQLDTLTIKTNALEETCSYQRDEILKLQQQLTAEKDKSKMANLSASETRIVFEDQQRIIHELQERLADKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSTGTDMVVSYPTSTEDLGRGIELLQSGQKYPFTFDKVFNHDASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPNASDLKGLIPRSLEQIFQISQSLEDQGWKYKMQASILEIYNETIRDLLANRSGGIDPTRTENGVPGKQYTIKHDANGNTHVTDLTVVDVCSVNEISSLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRICGTNEITGQQVQGVLNLIDLAGSERLSRSGATGDRLKEAQAINKSLSSLSDVIFALARKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSTKSFDSSRLSYG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0100 794 MobiDBLite consensus disorder prediction 1 20 - -
Lan16g0100 794 ProSitePatterns Kinesin motor domain signature. 672 683 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan16g0100 794 ProSiteProfiles Kinesin motor domain profile. 433 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 PANTHER KINESIN-LIKE PROTEIN 48 794 - -
Lan16g0100 794 MobiDBLite consensus disorder prediction 1 60 - -
Lan16g0100 794 Coils Coil 238 265 - -
Lan16g0100 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 771 IPR027417 -
Lan16g0100 794 Coils Coil 287 321 - -
Lan16g0100 794 SMART kinesin_4 431 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 Coils Coil 196 216 - -
Lan16g0100 794 Coils Coil 115 174 - -
Lan16g0100 794 PANTHER KINESIN-LIKE PROTEIN KLP-3 48 794 - -
Lan16g0100 794 CDD KISc_C_terminal 431 774 - -
Lan16g0100 794 MobiDBLite consensus disorder prediction 202 222 - -
Lan16g0100 794 Pfam Kinesin motor domain 439 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 Coils Coil 392 412 - -
Lan16g0100 794 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan16g0100 794 Gene3D Kinesin motor domain 351 774 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0100 Lan-Chr16 774158 779726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0100 405 784 Calmodulin-binding Proteins AT5G65930 38.817 2.12e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0100 K10405 - gmx:100808278 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1010 19 17398752 17404563 Lan16g0100 16 774158 779726 LSH
Lan18g0605 18 11065860 11072057 Lan16g0100 16 774158 779726 PCT
Lan16g0100 16 774158 779726 Lan18g0605 18 11065860 11072057 PCT