Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0091 ATGTTCGTCGGACAAATTTTCAGGCTGTCGCTGCCTACTATGCTCACTCTTTTGTTTTTCCTTTGCCTTGTAACTTCATCCTATTCAAGTGAGGTTCAATCACTTATGAAGTTTAAGTCCTCTATTCAGAGTTCAAATGCAAATTTGTTCAGTTCTTGGACACAAGAAAATTCTCCATGCAACTTCACAGGGATTGTGTGCAACACTGATGGTTTTGTCTCAGAAATCAACCTTGCAGATAAACAACTAGTTGGAACTCTTCCTTTTGATTCAATTTGCGCACTTCGGTCACTTGAAAGAATCTCTTTGGGGTCCAACTTCTTGCATGGAAGCATAAATGAGGAGTTGAGGAATTGCACCAACTTGAAGTACTTGGATTTGGGAGGGAATTCATTTTATGGAGCAGTGCCTGATTTGTCAAGTTTGAACAAGTTGCAATACTTGAGCTTAAATGCAAGTGGAATCTCTGGAACATTTCCATGGAAATCATTGGAGAATCTAACAAATCTCTCTTTCTTGAGCCTTGGTGATAACTTGTTAGAAGAATCTCTTTTCCCTCTTGAGGTCCTAAAGCTTAACAAAGTGTATTGGCTTTACTTAGCAAATTGCAGCATCACTGGAAATATTCCATTTGGTATTGGAAACCTCACTCACCTTGAGAATCTTGAACTTTCTGATAACCATTTGTATGGTGAGATTCCTGCTGATATTGTAAAGCTTCACAAGCTATGGCAACTTGAGCTTTATGACAACAACTTGAGTGGGAAAATTCCAGTTGGATTCGGCAACCTTGCCAATCTTGTTAACTTTGATGCTTCTTCTAATCGCCTCGAAGGTGATCTCTCTGAGCTAAGGTCCTTGACAAACCTTGCATCATTGCAGCTTTTTCAGAACAAACTCACAGGAAGAATTCCACAAGAGTTTGGAGATTTCAGAAACCTTACCGAAATTTCCCTTTATGATAACAAGCTCACTGGTTCTCTTCCACAAAACCTTGGATTTTGGAAAGGCTTGAAGTTCATAGATGTTTCAGATAATTCACTTTCTGGTCTTATACCACTTGACATGTGCAAGAACAACCAAATAAATGAGCTATCATTGTTAAACAACAGCTTCATTGGAAGTATACCCGAAACATACGCAAATTGCACATCTTTGCAACGTTTTCTACTTAATCATAATTCACTTTCAGGTGTTGTTCCTTCAGGTATATGGAGCTTGCCAAATCTGCAACTTATTGATCTTTCAATGAACAAGTTTGAAGGTTCAATAGCATCTGGTATTGGTAAAGCAAAACTTCTTGCTCAACTGTTTTTATCTGATAATCAGTTCTCAGGTGAGTTACCTTTGGAAATCTCGGAAGCTTCTTCATTGGTATCTATTCAGCTAAGTTCAAATCAAATTTCTGGTCATATACCAGAAATGATTGGAAAGTTGAAGAAACTAACTAGTTTTGATTTGAGTAATAACAACCTTTCTGGTATTATACCATACTCAATTAGTTCTTGTATTTCTCTAAATGAAATAAATCTTGCTGGTAACTCTCTTTATGGGGAAATACCTTCTAGTATTGGATCTCTACCTACCCTCAATTCATTGAACTTGTCCTCCAATAAACTTTCTGGTGAAGTTCCATCAAGTTTATCGCCCCGTACGCTTAGCCTTCTCGATTTATCAAACAACAAATTATTTGGTTCAATACCAGAACCACTAGCTATTTCAGCTTTCAGAGATGGTTTCATAGGAAATCCTGGCTTATGCAGCCAGACTTTGAAAAAATTTCAGCCATGTTCATCGGAATCAGGCAAGTCGAGAAGTCACAGAGCCCTTCTACTATGTTTGATGGCTGGTTTTATGCTTATGCTTCTTTCTTCAGCATATTTCCTCCTCATGAAACTGAACCATAACAAGACTGAGAAGCCACTCAAGAGAAATTCTTGGGATGTCAAGCAGTACCACATGCTAAACTTCAATGAGAATGAAGTTATTCATGGGATCAAGGATGAGAATTTGATTGGTAGCGGAGGATCGGGGAATGTATACAAGGTTGTGCTTAAAAGTGGCGCAGAATTCGCAGTGAAACACATATGGACTTCGAATCAAAGCGACCGCGGAAGTTGCAGGAGCAGCTCAGCTATACTTAAAAGGAGTTCAAGGTCACCTGAGTTTGATGCAGAAGTGGCCACTCTCAGCTCTATAAGGCATGTTAATGTGGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGTAATCTTCTTGTTTACGAGTTGTTACCGAATGGAAGCTTGTGGGACAGGTTACACACTTGTGATAAGAAGATAAAGATGGGGTGGAAGGTTAGATATGACATTGGTCTTGGAGCTGCTAGAGGATTGGAGTATCTGCACCATGGTTGTGATAGACCAGTTATACACAGGGATGTTAAGTCTAGTAATATATTGCTTGATGAAGAATGGAAGCCAAGAATTGCTGATTTTGGACTTGCCAAGATTGTGCAAGGAGGTGCAGGCAATTGGACCCATGTTATTGCTGGAACACTTGGATACATGGCCCCTGAGTATGCCTACACTGCTAAGGTGACAGAGAAGAGTGATGTTTACAGCTTTGGGGTAGTCCTAATGGAGCTAGTAACAGGGAAAAGGCCTATTGAGACAGAGTTTGGAGAGAACAAGGACATTGTGTGTTGGGTATGCAACAATATGAGGAGCAGCAAAGAAAATGCTATTGTTCAATTGGTGGACTCAACCATTTCAAAACATTTCAAGGAAGATGCAATGAAGGTGTTGAGAATAGCAACATTATGCACTGCCCGAATCCCATCTTCGAGACCATCGATGAGAATGGTGGTTCAAATGCTGGAAGAGACAGAGCCATGTACTCTAACCAACATAGTTTTGACCATAGATGGTTAA 2913 0.3965 MFVGQIFRLSLPTMLTLLFFLCLVTSSYSSEVQSLMKFKSSIQSSNANLFSSWTQENSPCNFTGIVCNTDGFVSEINLADKQLVGTLPFDSICALRSLERISLGSNFLHGSINEELRNCTNLKYLDLGGNSFYGAVPDLSSLNKLQYLSLNASGISGTFPWKSLENLTNLSFLSLGDNLLEESLFPLEVLKLNKVYWLYLANCSITGNIPFGIGNLTHLENLELSDNHLYGEIPADIVKLHKLWQLELYDNNLSGKIPVGFGNLANLVNFDASSNRLEGDLSELRSLTNLASLQLFQNKLTGRIPQEFGDFRNLTEISLYDNKLTGSLPQNLGFWKGLKFIDVSDNSLSGLIPLDMCKNNQINELSLLNNSFIGSIPETYANCTSLQRFLLNHNSLSGVVPSGIWSLPNLQLIDLSMNKFEGSIASGIGKAKLLAQLFLSDNQFSGELPLEISEASSLVSIQLSSNQISGHIPEMIGKLKKLTSFDLSNNNLSGIIPYSISSCISLNEINLAGNSLYGEIPSSIGSLPTLNSLNLSSNKLSGEVPSSLSPRTLSLLDLSNNKLFGSIPEPLAISAFRDGFIGNPGLCSQTLKKFQPCSSESGKSRSHRALLLCLMAGFMLMLLSSAYFLLMKLNHNKTEKPLKRNSWDVKQYHMLNFNENEVIHGIKDENLIGSGGSGNVYKVVLKSGAEFAVKHIWTSNQSDRGSCRSSSAILKRSSRSPEFDAEVATLSSIRHVNVVKLYCSITSEDSNLLVYELLPNGSLWDRLHTCDKKIKMGWKVRYDIGLGAARGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLAKIVQGGAGNWTHVIAGTLGYMAPEYAYTAKVTEKSDVYSFGVVLMELVTGKRPIETEFGENKDIVCWVCNNMRSSKENAIVQLVDSTISKHFKEDAMKVLRIATLCTARIPSSRPSMRMVVQMLEETEPCTLTNIVLTIDG* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0091 970 Gene3D Ribonuclease Inhibitor 186 283 IPR032675 -
Lan16g0091 970 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Lan16g0091 970 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Lan16g0091 970 SUPERFAMILY L domain-like 305 586 - -
Lan16g0091 970 SUPERFAMILY RNI-like 75 397 - -
Lan16g0091 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 12 963 - -
Lan16g0091 970 SMART LRR_sd22_2 216 242 - -
Lan16g0091 970 SMART LRR_sd22_2 335 356 - -
Lan16g0091 970 SMART LRR_sd22_2 95 118 - -
Lan16g0091 970 SMART LRR_sd22_2 119 144 - -
Lan16g0091 970 SMART LRR_sd22_2 479 508 - -
Lan16g0091 970 SMART LRR_sd22_2 264 292 - -
Lan16g0091 970 SMART LRR_sd22_2 167 189 - -
Lan16g0091 970 SMART LRR_sd22_2 311 334 - -
Lan16g0091 970 Gene3D Transferase(Phosphotransferase) domain 1 758 963 - -
Lan16g0091 970 SUPERFAMILY Protein kinase-like (PK-like) 658 955 IPR011009 -
Lan16g0091 970 Gene3D Ribonuclease Inhibitor 284 605 IPR032675 -
Lan16g0091 970 Pfam Protein kinase domain 668 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0091 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 963 - -
Lan16g0091 970 SMART LRR_typ_2 216 240 IPR003591 -
Lan16g0091 970 SMART LRR_typ_2 287 310 IPR003591 -
Lan16g0091 970 SMART LRR_typ_2 479 502 IPR003591 -
Lan16g0091 970 SMART LRR_typ_2 311 335 IPR003591 -
Lan16g0091 970 SMART LRR_typ_2 527 555 IPR003591 -
Lan16g0091 970 SMART LRR_typ_2 407 431 IPR003591 -
Lan16g0091 970 Gene3D Phosphorylase Kinase; domain 1 649 757 - -
Lan16g0091 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Lan16g0091 970 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lan16g0091 970 PRINTS Leucine-rich repeat signature 482 495 - -
Lan16g0091 970 PRINTS Leucine-rich repeat signature 527 540 - -
Lan16g0091 970 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lan16g0091 970 SMART serkin_6 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0091 970 ProSiteProfiles Protein kinase domain profile. 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0091 Lan-Chr16 732493 736366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0091 17 967 Receptor kinase-like Gene Family AT1G09970 57.098 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan16g0091 Pkinase 6.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0091 - - gmx:100811489 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1013 19 17423531 17427837 Lan16g0091 16 732493 736366 LSH