Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0075 ATGAGTTCTGAAGGTGTCACCGAAGATTGCCTAGGATGGGCAGCAAGAGATCCATCCGGAGTTCTCTCGCCTTACAAATTCAGTCGCAGGGCTGTTGGGGATGACGATGTGTATGTTAAAATTACACACTGCGGTGTTTGTTACGCCGATGTAATTTGGACAAGGAATCATCATCATGACTCAAAGTATCCTCTTGTGCCTGGACATGAGATTGCTGGGATTGTGACAAAGGTTGGTTCCAATGTGCACCGTTTCAATGTTGGTGACCATGTTGGAGTAGGGACTTATGTCAACTCGTGCCGGGATTGTGAGTTTTGTAATGACCAAGTAGAAGTTAATTGTGTCAAAGGATCAGTTTTTACTTTTAATGGAGTTGATTTTGATGGTACAATTACAAAAGGAGGATATTCAAGTCACATAGTTGTACATGAAAGGTATTGCTTTGTTATACCGAAAAGCTATCCATTGGCTTCAGCAGCTCCTTTGCTCTGTGCTGGAATTACAGTTTATTCTCCAATGATACGCCACAAGATGAATCAACCCGGTAAATCTCTGGGAGTGATTGGTCTTGGTGGCCTCGGTCACATGGCAGTGAAATTTGGAAAGGCATTTGGGTTGAATGTAACAATTTTGAGCTCTAGCATATCCAAGAAAGAGGAGGCACTGACTCTGCTTGGTGCAGACAAATTTGTATTATCATCTGATCCAGAACAAATGAAAGCATCGGCTAAGTCACTTGACTTCATAATTGACACAGCATCCGGCGATCACCCTTTTGATCCTTACATGTCACTGCTGAAGACATATGGTGTTTTTGTCTTAGTTGGGTTCCCTAGTGTAATCAAATTCGGCCCTGCAAACCTTAATATAGGAATGAAAACCTTATCTGGAAGTATTACAGGTGGTACAAAAGATATACAAGAGATGATTAACTTCTGCGCTGAAAAAGAGATTTATCCGAACATAGAAGTAATTCCAATCGAGTATGCGAATGAAGCTCTTGAGAGGGTCGTAAATAAGGATGTGAAATATCGGTTCGTGATAGATATTGAGAACTCCTTGAAAGCATAA 1071 0.4127 MSSEGVTEDCLGWAARDPSGVLSPYKFSRRAVGDDDVYVKITHCGVCYADVIWTRNHHHDSKYPLVPGHEIAGIVTKVGSNVHRFNVGDHVGVGTYVNSCRDCEFCNDQVEVNCVKGSVFTFNGVDFDGTITKGGYSSHIVVHERYCFVIPKSYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTILSSSISKKEEALTLLGADKFVLSSDPEQMKASAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSVIKFGPANLNIGMKTLSGSITGGTKDIQEMINFCAEKEIYPNIEVIPIEYANEALERVVNKDVKYRFVIDIENSLKA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0075 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Lan16g0075 356 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Lan16g0075 356 SUPERFAMILY GroES-like 16 183 IPR011032 -
Lan16g0075 356 Gene3D - 13 350 - -
Lan16g0075 356 CDD CAD1 12 349 - -
Lan16g0075 356 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Lan16g0075 356 PANTHER - 2 354 - -
Lan16g0075 356 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Lan16g0075 356 Gene3D - 165 320 - -
Lan16g0075 356 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Lan16g0075 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0075 Lan-Chr16 443611 446710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0075 2 355 Monolignol Biosynthesis Gene Families AT1G72680 76.554 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0075 K00083 - gmx:100807617 638.262