Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0067 ATGGATGCTCAAGGTAGTGGCGGTGGTGGAAGAGCTGAAGCGGAGCGGTGGCTTTTCACGGCGAACAAGCTTTTAACCGCACGTGACTTGCACGGTGCTCGTTCATTCGCGATCCGTGCCAGAGAATCTGACCCGAGATATGAAGCGACGGAGCTTCTACTCGTTGTTATCGACACTCTCCTTGCCGGTGAGGTACGGATCGGAGAGCATTTACTCGATTGGTACTCAATCCTTCAGGTACTTCGATACACTCATAGTATTGAGTATATTGCTGCACAGTACCGTCGTCTCGCTATACTCCTCGATCCTAATCGGAACCCTTTCGCTTTCACAAATCATGCACTTCAGCTCGTGCATGATGCGTGGTCTGTCTTGTCTAACCCTAACAAGAAAATTATCTATGATAATGACCTTAGGTTGTTGACTGAACCACCTCAACAACGGCCTCCTCCTCCTCCTGTGGTTACCGGTTTTCAATTCCCTCCTCCCAGACAAAACCAAGATCAAAACCAGCATCAGCTCAATCAGAATCAGACTCCTGTCTACCAGAGTCAACAACAACAGCAGCAGCAGCAGCAGCAGGTTCCGATTAGGAAAAACCCTAAGCCTTCGAATCAGGCTAGGGTGGTGGTTGTTGAGGAAGAGAGGCATAATGAGACTGAACCTGAACCGGTTCAGGTGAACCAGACTGGTGACGCGACATTGACTCGGTCTGAGACTGTGCCAGTGACTGAGACTGAAAATGAGGTACCGAGTTTTTGGACTGCATGTCCTTATTGCTATGTTATGTATGAGTATCCTAAGGTGTATGAGGACTGCACTCTCCGGTGCCAGAGTTGCCGGAGGGGGTTTACTGCACTGGTGGTTAAGGCACCACCCAATTTGGGCATGAACGATGATGGTTACTGCAGTTGGGGGTTTATTCCGGTAGGGTTTTCAGGCAACTCCAAAGACTTGAGTGGGGGTTCTTCTGAGTGGAACCCGTTTTCCCCTTTGTTTCCTTGCCCTCTGAAGGGTCGGAGGGGTCGGAAGGGGCCTGTGGCTTACTATGATCAGGAAGCTTGTACTGCGTTTGTGGAGAAAGAACTTTCGGATTCGAGTGATGATTCCGATGACGGGGACTGGCGGAATACTTACACTAAGAAGCTGAGGAAGAGGGCAAGGGGGAGTGGAAGGAGGACAGGCATTGCCTCTGCTAGTGGTGTTGTTAGGAGGTCAGCGGTTGATAGGCCAAGGAGGGGGGTTCAGAATAGTGCCGAGGATGGCAATGTGGCTAATGGTGAGGCTGTTAATGGTGACGGTGGTGGTGGGTCTGCGCCTGCGGTGCCAGTTGCTGCGCGGCCAGACACGAGCAAGAAGACTGTGTTGGTTGGTGCCAGGAGGAGGGCTGCAGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAAGAGCATGCCCCTGGAGTGAGTGGACGGAATGGCAGGAATGCCAGTGGGAATGCGACTGGGACTGGACATGCCGAGGATAACATTGAAGGCATTGGGTTTTTTGAGGGGCTTGATGAGTTCCTCAGTAGCTTACCCATTCTAAATGTTGTTGCCGATGATAAGGTTAAGGGTCACTAG 1620 0.5111 MDAQGSGGGGRAEAERWLFTANKLLTARDLHGARSFAIRARESDPRYEATELLLVVIDTLLAGEVRIGEHLLDWYSILQVLRYTHSIEYIAAQYRRLAILLDPNRNPFAFTNHALQLVHDAWSVLSNPNKKIIYDNDLRLLTEPPQQRPPPPPVVTGFQFPPPRQNQDQNQHQLNQNQTPVYQSQQQQQQQQQQVPIRKNPKPSNQARVVVVEEERHNETEPEPVQVNQTGDATLTRSETVPVTETENEVPSFWTACPYCYVMYEYPKVYEDCTLRCQSCRRGFTALVVKAPPNLGMNDDGYCSWGFIPVGFSGNSKDLSGGSSEWNPFSPLFPCPLKGRRGRKGPVAYYDQEACTAFVEKELSDSSDDSDDGDWRNTYTKKLRKRARGSGRRTGIASASGVVRRSAVDRPRRGVQNSAEDGNVANGEAVNGDGGGGSAPAVPVAARPDTSKKTVLVGARRRAAGNLGKLDLNVEFSNEVEEHAPGVSGRNGRNASGNATGTGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0067 539 MobiDBLite consensus disorder prediction 214 233 - -
Lan16g0067 539 MobiDBLite consensus disorder prediction 481 504 - -
Lan16g0067 539 ProSiteProfiles dnaJ domain profile. 73 138 IPR001623 -
Lan16g0067 539 MobiDBLite consensus disorder prediction 141 207 - -
Lan16g0067 539 CDD DnaJ 73 127 IPR001623 -
Lan16g0067 539 MobiDBLite consensus disorder prediction 160 201 - -
Lan16g0067 539 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 177 - -
Lan16g0067 539 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 174 539 - -
Lan16g0067 539 MobiDBLite consensus disorder prediction 144 159 - -
Lan16g0067 539 Gene3D DnaJ domain 72 208 IPR036869 -
Lan16g0067 539 SUPERFAMILY Chaperone J-domain 70 138 IPR036869 -
Lan16g0067 539 SMART dnaj_3 72 130 IPR001623 -
Lan16g0067 539 MobiDBLite consensus disorder prediction 383 453 - -
Lan16g0067 539 Pfam DnaJ domain 73 135 IPR001623 -
Lan16g0067 539 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 174 539 - -
Lan16g0067 539 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 7 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0067 Lan-Chr16 386485 388441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0067 13 538 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.477 1.50e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0067 - - lang:109345659 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0734 4 9600782 9602594 Lan16g0067 16 386485 388441 LSH
Lan17g0645 17 5591649 5593879 Lan16g0067 16 386485 388441 PCT
Lan18g0638 18 11466189 11467917 Lan16g0067 16 386485 388441 PCT
Lan6g0660 6 5881979 5883749 Lan16g0067 16 386485 388441 PCT
Lan16g0067 16 386485 388441 Lan17g0645 17 5591649 5593879 PCT
Lan16g0067 16 386485 388441 Lan18g0638 18 11466189 11467917 PCT
Lan16g0067 16 386485 388441 Lan6g0660 6 5881979 5883749 PCT