Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0060 ATGGCCACCGCAACCGCCACCAACTCACGACCACCGCCGCAACAATCACTGAACTTAGAGTCTCTTTCCGGCATTGATTCAACAACTTTGTCACAGTCTGAAATTCAAAACCTCTCTCTCTGCTCTCTCTCCACTTTCGATCTTCGCTCAACGTGTCACCTTGTTACTCCAATAATCGACCCTTCTTTCTTCAACGAGAGCTCCGGTTCCCGCCGACAAACCTACTCCCGCCGTCACCGCCTTCCCGGTCTCATTACTGCCACCAAAGATGTCGTCACCGATCACAACACCGATAACCGTAGAATCATCGATTATTTAAAGCAATTGATAAGAGAGGATCCGAAGTTCGATCAAATTGAGCTTCTTCAACCTAGTGTTCACACGGAGATTGTTGCTCATACTAGTGATGTGAGAGAGAGAAGGGAGTTAGGGTTAGTGAGGAAGAGGAAGAGAGGGAGGAAGCCGAAGATGAAGGTGAATTTGGATGAGTGTTACAGAGGAATGGAGATTGTGAACAAAAACGGTGTCGCTATCGATTTATTGGCGTTGGCGGTTGTGGAAGATCCGTATGGCGAGGAATTGAGGAGAAGGAGTGAGGGATTGAAGAGTGAAGAGGAGTTGTTAGGGTTTTTGAGAGATTTGGAGGGGCAATGGGGAAGCAGGAGAAGGAAGAGGAAGATTGTGGATGCTGCCAGTTTCGGCGATGTCTTGCCACTTGGTTGGAAGCTTTTGCTTGGGTTGAAGAGGAAGGGTGGTCGTGCTTGGATCTATTGCCGCAGATACATGAGCCCCACTGGACAGCAATTTCTGTCTTGCAAAGAAGTTTCTTCATATTTGCAGTCTCTCTCCAGTCATAATGATGCACAGTTACAAATCAGTTATAGGAGTGAGCATATGCAGCAGGAACATACAGTGACTATGAAGGAACATACAATGACTACTGAAAATTCTAAAGGTGTTACCCACGAGGATCGAGACCAATGGCAGATTGTTGTAGCTAACTCAGATGTGCCCACTTTACCTGTTTCTAATGAACGCTTGAAGGAAGTGGCCTTACTGGGGATTGACAATCTTGCAGATGTGCAAATACATGACCTATTTGAATGTCACAGATGCAACTTGAGCTTTGATGAGAAGGATACATACTTGCAGCACCTATTGTCAGTTCACCAGAGGACAACAAGGCGTTATCGAATTGGTTCTTCTGTTGGAGATGGAGTTATAATTAAAGATGGAAAGTTTGTGTGCCAGTTCTGCCATAAGATGTTTCAGGAAAGGCATCGTTACAATGGCCACGTGGGGATCCATGTTAGGAATCATGTGAGGAAAGATGAAGATTTGCCAGCTCAGGCAAATGTCCAAAGGAGTGACAATTCTCTAGTCCAGGAGGACATACCTTCAAGGATCTCTAAGATGGATGCCCTTATTGAAATTGCTCAAAACTCTATCATGGAGAATTCTGTCATGGAACCCCATATTTCAGTCGAACTTAATTTAATTCCCGCTTCAGAAATTGCTGTTGGTGACTTAGATCGAGACATAAACATGGAGTCTCCTATTGGTGAACAGCAAATGGAGTATTGCATGACTGGAAAAAATGTGGTTCAAGATTTAAATCAGCAAGATTGTCCACATTTACTTGGGGATGGGAAAGTAGAGGAGACTGATGCTGATAACCAAGTTATAGATGCAAAGATGGTTACTTGTCTAGATAACCTGGAGTTGTTTTCTGTAAATGAGCAAAATGTTAATGCACATGATGACGCGGCATTGACCGTTGCGGGGTTTGATCAGTTTGGGATTGATTTGGAGGGAGTTTCTCAAAGCCCTTCTTCACTTCATTTATGTGGCAATTACATGATACCTGAATCTGAGAAGAATGAAAACTCTGGTTGCACTAATGCCAAGCAGCAGTTTAAGCTTGATGGAGACAGAAGTAATAGGAGCGCTGGGTTAGATGGCTGCATAGATGTACCTGTTAGCGTTAATGTTCAATCGACGGTGATGCCAGCTTCTTTAGAAAACGTGGAGCATTCGAGGGATTCGAAGCAATCTATATCTACAAAGCAATCTTTGGATTGTTTTCCTTGGATCACCTCAGATAAGGGTGGAAAGCAATTTTGCAGTGTTGACCATGAACATGATAATGCGAAGGGGTTCCGAGAACTTAGGTTGGATGAAATAGGTCTTCAATACGATTTTGCAAGTGGTCAAACTTCTCTTACTCTGTCTGATGTGACAACTGAGTTGGCAAGCAACACAGTGATGGAAGGGATGCATGCATCCCCAGTTCAACAAGAAGTTATGTTAAATATGGATGACAGAACTCAGCTCACTGCTGTGTGCATATGGTGTGGAATAGACTTTAACCACGACACTGTCGATTCTGAAATACAGCCAGATTCTGTTGGATTCATGTGTCCAGCTTGTAAGGCAAAGATCTCTGGTCAAATCAATGTGTTTGACAGTAGAACACCAAATGCCGATCATCTTTAG 2496 0.4375 MATATATNSRPPPQQSLNLESLSGIDSTTLSQSEIQNLSLCSLSTFDLRSTCHLVTPIIDPSFFNESSGSRRQTYSRRHRLPGLITATKDVVTDHNTDNRRIIDYLKQLIREDPKFDQIELLQPSVHTEIVAHTSDVRERRELGLVRKRKRGRKPKMKVNLDECYRGMEIVNKNGVAIDLLALAVVEDPYGEELRRRSEGLKSEEELLGFLRDLEGQWGSRRRKRKIVDAASFGDVLPLGWKLLLGLKRKGGRAWIYCRRYMSPTGQQFLSCKEVSSYLQSLSSHNDAQLQISYRSEHMQQEHTVTMKEHTMTTENSKGVTHEDRDQWQIVVANSDVPTLPVSNERLKEVALLGIDNLADVQIHDLFECHRCNLSFDEKDTYLQHLLSVHQRTTRRYRIGSSVGDGVIIKDGKFVCQFCHKMFQERHRYNGHVGIHVRNHVRKDEDLPAQANVQRSDNSLVQEDIPSRISKMDALIEIAQNSIMENSVMEPHISVELNLIPASEIAVGDLDRDINMESPIGEQQMEYCMTGKNVVQDLNQQDCPHLLGDGKVEETDADNQVIDAKMVTCLDNLELFSVNEQNVNAHDDAALTVAGFDQFGIDLEGVSQSPSSLHLCGNYMIPESEKNENSGCTNAKQQFKLDGDRSNRSAGLDGCIDVPVSVNVQSTVMPASLENVEHSRDSKQSISTKQSLDCFPWITSDKGGKQFCSVDHEHDNAKGFRELRLDEIGLQYDFASGQTSLTLSDVTTELASNTVMEGMHASPVQQEVMLNMDDRTQLTAVCIWCGIDFNHDTVDSEIQPDSVGFMCPACKAKISGQINVFDSRTPNADHL* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0060 831 SUPERFAMILY DNA-binding domain 232 286 IPR016177 GO:0003677
Lan16g0060 831 Gene3D - 215 327 - -
Lan16g0060 831 SMART c2h2final6 367 390 IPR013087 -
Lan16g0060 831 SMART c2h2final6 414 436 IPR013087 -
Lan16g0060 831 ProSiteProfiles Zinc finger C2H2 type domain profile. 367 395 IPR013087 -
Lan16g0060 831 ProSiteProfiles Zinc finger C2H2 type domain profile. 414 441 IPR013087 -
Lan16g0060 831 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 15 820 - -
Lan16g0060 831 Pfam Methyl-CpG binding domain 236 284 IPR001739 GO:0003677
Lan16g0060 831 ProSitePatterns Zinc finger C2H2 type domain signature. 369 390 IPR013087 -
Lan16g0060 831 ProSitePatterns Zinc finger C2H2 type domain signature. 416 436 IPR013087 -
Lan16g0060 831 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 15 820 IPR037472 -
Lan16g0060 831 Gene3D Classic Zinc Finger 363 465 - -
Lan16g0060 831 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 227 299 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0060 Lan-Chr16 338503 343093 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan16g0060 MBD 4.2e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0060 - - lang:109329666 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0742 4 9632150 9639940 Lan16g0060 16 338503 343093 LSH