Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0053 ATGAGTCAGCGTGTCAGCGACGAGGTTGTGGCGATGGCTATGGGGGAACTAAGAAGTGTTCATTCTTCAGGTCGACATGGCGAAACATTGCCATATGTTCATAAGGTTGGATCTCCTCCTAAGCAAAGTCTTTTCCAAGAGATCAAACATTCTGTGAATGAAACTTTCTTCTCAGACAACCCTTTAAAGGAGTTTAAGGACCAAACCATACAAAGAAAGTTTGTTCTAGGCCTACGAGCCGTATTCCCGATTTTCGATTGGGCTAGAGGTTACAACCTTAAAGCATTCAGAAGTGATTTCATTTCTGGACTTACCATTGCAAGTCTTTGTATTCCTCAGGACATTGCATATGCAAAGCTCGCAAATTTGGATCCCCAATATGGACTATATACTAGCTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCACGAGATATTGCGATAGGACCAGTAGCAGTGGTGTCCCTCTTGCTTGGAACTATGCTTTCCGACGAGATTAAGGACTACCATAGCCATGAATATCTACGTCTCGCATTTACCGCTACCTTCTTTGCAGGAATTACTCAAATGGCACTTGGAGTTTTAAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATCGTCGGATTCATGGCTGGCGCAGCCATTACTATTGCGCTGCAACAGCTGAAAGGTCTGCTTGGCATAAAAAACTTCACTAAGAAAACCGACATTGTTTCTGTCATGGACTCAGTTTGGAGTTCAGTGCACCATGGGTGGAATTGGCAGACAATAGTGATAGGAGTATCATTCTTGGCCTTCCTTCTTATAACCAAGTATATTGCTAAAAGGAAAAAGAAGCTCTTTTGGGTGGCTGCAATTGCTCCTATGACCTGTGTCATACTGTCGACCCTTTTTGTTTACATTACCCGGGCTGACAAGAAAGGCGTATCGATAGTGAAACATATTAAAAAAGGTGTGAATCCAGCATCTGCTAGTGAAATATTTTTCAGTGGAAAATATTTGAGCGCAGGTGCTCGAATTGGTGTGGTAGCTGGCATGGTTGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTTGATGGTAACAAAGAAATGGTGGCTCTAGGAACAATGAACATCATTGGTTCATTAACATCATGTTATGTAGCTACAGGATCATTTTCTCGCTCCGCAGTGAACTATATGGCCGGTTGTAAAACCGCTGTATCAAACATCGTTATGGCCCTTGTTGTACTGTTAACTCTCTTAGTCATTACACCATTGTTTAAGTACACACCAAATGCAGTGCTAGCTTCTATTATAATAGCGGCTGTATTAGGCCTTATCGACATTCAAGCTGTTATTCTGCTATGGAAGATAGATAAATTTGACTTCTTAGCTTGCATGGGAGCTTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTTGCAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGACCAAGGACTGCAGTACTCGGGAAGCTTCCGGGGACTAGTGTTTACAGGAACATCCAGCAATATCCAAATGCAACTCAGGTTCCTGGCATGCTTATTATAAGAGTTGACTCTGCAATCTACTTCTCAAACTCGAACTACATCAAGGAAAGAATTTTGAGATGGCTGACTGATGAAGATACTCGAAGGACCGGAAGTGAATTACCCGAAATACATTATCTTGTGGTTGAAATGTCGCCTGTTACTGATATTGACACTAGTGGCATCCATTCCTTGGAAGAGTTATATAAGAGCCTTCACAAAAGGGATGTACAGCTTGTGTTGGCAAACCCTGGACCAATTGTGATGGAGAAGCTCCATGCATCCAACTTAACTGACTTAGTTGGAGAACATAAAATCTTTCTATCAGTGGCTGATGCTGTTGCAACTTTTGGTACAAAGGGTGCAGAATCATGA 1974 0.421 MSQRVSDEVVAMAMGELRSVHSSGRHGETLPYVHKVGSPPKQSLFQEIKHSVNETFFSDNPLKEFKDQTIQRKFVLGLRAVFPIFDWARGYNLKAFRSDFISGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTMLSDEIKDYHSHEYLRLAFTATFFAGITQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKNFTKKTDIVSVMDSVWSSVHHGWNWQTIVIGVSFLAFLLITKYIAKRKKKLFWVAAIAPMTCVILSTLFVYITRADKKGVSIVKHIKKGVNPASASEIFFSGKYLSAGARIGVVAGMVALTEAVAIGRTFAAMKDYSLDGNKEMVALGTMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMALVVLLTLLVITPLFKYTPNAVLASIIIAAVLGLIDIQAVILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPNATQVPGMLIIRVDSAIYFSNSNYIKERILRWLTDEDTRRTGSELPEIHYLVVEMSPVTDIDTSGIHSLEELYKSLHKRDVQLVLANPGPIVMEKLHASNLTDLVGEHKIFLSVADAVATFGTKGAES* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0053 657 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Lan16g0053 657 PANTHER SULFATE TRANSPORTER 19 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan16g0053 657 Gene3D STAS domain 507 653 IPR036513 -
Lan16g0053 657 SUPERFAMILY SpoIIaa-like 529 650 IPR036513 -
Lan16g0053 657 TIGRFAM sulP: sulfate permease 83 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan16g0053 657 Pfam STAS domain 528 646 IPR002645 -
Lan16g0053 657 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 655 - -
Lan16g0053 657 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Lan16g0053 657 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lan16g0053 657 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0053 Lan-Chr16 296404 300450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0053 15 653 Inorganic Solute Cotransporters AT1G22150 72.031 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0053 K17470 - gmx:100784124 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1047 19 17678342 17681632 Lan16g0053 16 296404 300450 LSH