Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0022 ATGGAGAGAAATTCTAGTTCATATAGTCCTCACCTAACCTCTAGTTTAAAGAAGAATTCTACAAAACACCAGCTTGATGATCATTCAAAGCAGCAGCAGCAGCATCATCTTAGAGAAGATTATATCTCTTCATCATCTTTCAATCTGAAGAATGTTTCTAAACTCATTCTTCCACCACTTGGTGTTTCAAACCAGAATCAGTTAAACTCAAAAGGGTGGGTCATATCTCCAATGGATTCAAGATACAGGTGTTGGGAGAGTTTAATGGTTGTACTGGTAGCTTATTCAGCATGGGTGTATCCATTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAAAAAAATTGACATTATGGACAATGTTGTTGATCTTTTCTTTGCTGTTGATATTGTCTTGACATTCTTTGTGGCATACATTGATCGAACAACTCATCTACTAGTTCGAGATTCCAAGAAGATAGTAGTGAGGTACATGACAACATGGTTGGTAATGGATGTGGCATCAACAATACCATATGATGAAATGAGTTATTTATTAAGTGGCAAACACAGAGTGGCTCTCCCTTTTCTTCTCTTGGGCTTACTCAGATTTTGGCGTATCAGACGTGTCAAGCAATACTTCACTAGGCTTGAAAAAGACATCAGGTTCAGCTATTTCTGGGTCCGATGTGCTAGGCTTCTTTCTGTAACACTGTTTTCAGTTCATTGTGCTGGGTGCCTGTATTACATGCTAGCTGAATTGTACCCTCACCAAGGAAAGACATGGATTGGAGCAGTGATACCAAACTTCAAAGAGACAAGCCTTTGGATCAGATATATTTCAGCAATGTATTGGTCCATCACCACCATGACCACTGTTGGTTATGGAGACCTTCATGCTGTCAACACCAATGAAATGATCTTCATTATTTTCTACATGCTCTTCAACCTTGGTCTCACTGCTTACTTGATTGGAAACATGACTAATCTTGTTGTTGAAGGAACTCGCCGCACCATGGAGTTTAGAAATAGCATTGAAGCAGCATCAAACTTTTTGTGCCGAAATAGGTTGCCACCAAGGTTAAAAGAGCAGATCCTGGCCTACATGTGTTTAAGATTCAAAGCTGAGAGCTTGAATCAACATCACCTTATTGAACAGTTACCAAAGTCTATTTGCCAAAGCATCTGCCACCATTTGTTCTTTGCAACTGTAGAGAAAGTGTATCTTTTCAAAGGAGTCTCAAAAGAAATTCTTTTGTCCTTGGTTGCAAAAATGAAGGCGGAATATATACCACCTAGGGAGGATGTTATAATGCAAAGTGAATCACCTGATGATGTTTACATTATAGTGTCAGGAGAAGTGGAAATAATCGATTGTGTGATGGAGAAAGAGATAACTTTAGGGACTCTACACACAGGTGACATGTTTGGAGAAGTTTGTGCACTTTGTTGTAGACCTCAGAGATTTACCTTTAGAACCAAAACTCTCACTCAGCTCCTCAGGTTGAAAACCAATACCCTCATAGAAGTAATGCAGATTAAAAAGGAAGACAATATACAAATTCTCAAAAATCTACTTCAGCATTTCAAGCAGCTTAAGGAACTGAGTATTGGAGATTTAATGGTGGAGAATATGGAAGAAGAAGAAGAAGAAGATCCAAACATGTCTGTAAACTTGTTAAGTGTGGCCAGCATAGGCAATGCTGCTTTTCTTGAAGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCTAAAGGGAAAACCCCATTGCACATAGCAGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCCTACTCAAGCATGGATGCAATGTACACATAAGAGACATGGATGGTAACACTGCATTATGGGATGCTATAGCATCAAAACATTACTCCATATTCCGGATCCTATACCAGCTTGTAGCTCTCTCTGATCCTCACATAGCAGGAGATCTCCTATGTACAGCAGCAAAAAGAAGTGATGTAACTTTGATGAATGAGTTACTAAAGCAAGGATTAAATGTAGACTCTAAAGACCACCATGGTATAACACCAATCGAAATTGCCATGGAACAAAATCACGTGGACATGGTTAAGTTGCTTGTGATGAGTGGTGCAGATGTAACTGGTATACATACTCATGAATTTTCTGCATCCACCTTAAGTGAAATGCTGAAGAAGCGTGCGATTGGACATCTAATCAATATACATGAGGCCATACCCAGTGAGATTGTATTAAGGGGGCCATGTGAAGAAGATAAAGAACGCATTTGGGGAAGATATAATGGGCTAAACTGTCCAAGAGTTAGTATATATAGAGGCCACCCTATACTGAGAAAAGATAAAGGTGTCATGGAAGCTGGTAAGCTAATAAGGTTGCCTGATTCATTTGAGGAGCTTAAAACTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGTAATGGTGACAGATGAAGAAGGAGCAGAAATAGACTCCATCGACGTGATCAGAGATAATGATAAGCTTTTTTTGGTTGAATAG 2514 0.3922 MERNSSSYSPHLTSSLKKNSTKHQLDDHSKQQQQHHLREDYISSSSFNLKNVSKLILPPLGVSNQNQLNSKGWVISPMDSRYRCWESLMVVLVAYSAWVYPFEVAFMHSSPNKKIDIMDNVVDLFFAVDIVLTFFVAYIDRTTHLLVRDSKKIVVRYMTTWLVMDVASTIPYDEMSYLLSGKHRVALPFLLLGLLRFWRIRRVKQYFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLAELYPHQGKTWIGAVIPNFKETSLWIRYISAMYWSITTMTTVGYGDLHAVNTNEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFLCRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICHHLFFATVEKVYLFKGVSKEILLSLVAKMKAEYIPPREDVIMQSESPDDVYIIVSGEVEIIDCVMEKEITLGTLHTGDMFGEVCALCCRPQRFTFRTKTLTQLLRLKTNTLIEVMQIKKEDNIQILKNLLQHFKQLKELSIGDLMVENMEEEEEEDPNMSVNLLSVASIGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGHEECVKVLLKHGCNVHIRDMDGNTALWDAIASKHYSIFRILYQLVALSDPHIAGDLLCTAAKRSDVTLMNELLKQGLNVDSKDHHGITPIEIAMEQNHVDMVKLLVMSGADVTGIHTHEFSASTLSEMLKKRAIGHLINIHEAIPSEIVLRGPCEEDKERIWGRYNGLNCPRVSIYRGHPILRKDKGVMEAGKLIRLPDSFEELKTIAGEKFGFDAKDVMVTDEEGAEIDSIDVIRDNDKLFLVE* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0022 837 ProSiteProfiles Ankyrin repeat profile. 677 709 IPR002110 GO:0005515
Lan16g0022 837 SUPERFAMILY cAMP-binding domain-like 329 521 IPR018490 -
Lan16g0022 837 PRINTS Ankyrin repeat signature 581 596 IPR002110 GO:0005515
Lan16g0022 837 PRINTS Ankyrin repeat signature 693 707 IPR002110 GO:0005515
Lan16g0022 837 SUPERFAMILY Voltage-gated potassium channels 77 325 - -
Lan16g0022 837 Pfam Cyclic nucleotide-binding domain 423 505 IPR000595 -
Lan16g0022 837 ProSiteProfiles cAMP/cGMP binding motif profile. 402 521 IPR000595 -
Lan16g0022 837 SUPERFAMILY Ankyrin repeat 510 718 IPR036770 -
Lan16g0022 837 CDD CAP_ED 402 515 IPR000595 -
Lan16g0022 837 SMART cnmp_10 402 519 IPR000595 -
Lan16g0022 837 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0022 837 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0022 837 PRINTS EAG/ELK/ERG potassium channel family signature 272 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0022 837 PRINTS EAG/ELK/ERG potassium channel family signature 298 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0022 837 PRINTS EAG/ELK/ERG potassium channel family signature 316 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan16g0022 837 ProSiteProfiles Ankyrin repeat region circular profile. 677 704 - -
Lan16g0022 837 Pfam KHA, dimerisation domain of potassium ion channel 763 835 IPR021789 -
Lan16g0022 837 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 44 837 - -
Lan16g0022 837 SMART ANK_2a 547 576 IPR002110 GO:0005515
Lan16g0022 837 SMART ANK_2a 613 644 IPR002110 GO:0005515
Lan16g0022 837 SMART ANK_2a 580 609 IPR002110 GO:0005515
Lan16g0022 837 SMART ANK_2a 677 706 IPR002110 GO:0005515
Lan16g0022 837 Pfam Ion transport protein 83 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan16g0022 837 PANTHER POTASSIUM CHANNEL AKT1 44 837 IPR045319 GO:0005249|GO:0006813
Lan16g0022 837 MobiDBLite consensus disorder prediction 20 34 - -
Lan16g0022 837 Gene3D Jelly Rolls 369 546 IPR014710 -
Lan16g0022 837 Pfam Ankyrin repeats (3 copies) 556 634 IPR002110 GO:0005515
Lan16g0022 837 ProSiteProfiles KHA domain profile. 764 837 IPR021789 -
Lan16g0022 837 MobiDBLite consensus disorder prediction 1 19 - -
Lan16g0022 837 ProSiteProfiles Ankyrin repeat region circular profile. 580 611 - -
Lan16g0022 837 ProSiteProfiles Ankyrin repeat profile. 580 612 IPR002110 GO:0005515
Lan16g0022 837 Gene3D - 83 325 - -
Lan16g0022 837 Gene3D - 549 730 IPR036770 -
Lan16g0022 837 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0022 Lan-Chr16 109880 113860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0022 31 585 Ion Channels AT4G22200 72.401 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0022 K21867 - gmx:100798422 1320.06