Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0021 ATGGACAAGTACGAGCTGGTGAAGGATATAGGATCTGGCAATTTTGGGGTTGCTAGGCTTATGCGTAACAAACTAACCAAAGACCTTGTTGCCATGAAATTCATTGAACGTGGTCACAAAATAGATGAGAATGTTGCAAGGGAAATCATAAACCACAGAAGTCTTAGCCATCCCAACATTATTCACTTCAAGGAGGTGGTGTTGACTCCCACACACCTTGGAATAGTGATGGAGTATGCAGCAGGTGGAGAGCTCTTTGAGCGAATTTGCAATGCTGGAAGGTTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATTTCAGGAGTTTGCTACTGTCATGCCATGCAAATCTGCCATCGAGACTTGAAGCTGGAGAACACCTTATTGGATGGCAGCCCTGCCCCACGTCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTTTGCTTCATTCAAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATTGCACCAGAGGTTTTTTCACGTAGAGAATATGATGGAAAGATGGCAGATGTTTGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTTGGAGCATACCCATTTGAAGACCAAGAGGATCCCAAAAACTTCAGGAAAACCATAAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGCAGGCGTCTGCTATCTCGTATTTTTGTGGCAAATCCAGTTAGGAGAGTAACCATTAAGGAACTAAAGTCCCACCCATGGTTTTTAAAGAATTTGCCTAGAGAATTGACAGAAATGGCTCAAGCTGTCTACTACAGAAAAGAAGATCCAACCTTTTCCCTCCAGAGCATAGAAGACATCATGAATATTGTTGAGGAGGCCAAAACTCCAGCTCTAGTTTCGTGGTCAATTGGAGGATTTGGCTGGGGTGATGAAGAAGAAGAAGATGAAGAAGAAGAAACGAAAGAAGCAGCAGAAGCTGGGGAGGAAGATGAGTATGAATTGAGGGTGAAGGAGGCTCAGGCTAGTGGAGAGTTTCATATCAGTTAA 1065 0.4319 MDKYELVKDIGSGNFGVARLMRNKLTKDLVAMKFIERGHKIDENVAREIINHRSLSHPNIIHFKEVVLTPTHLGIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVCYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVFSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRRLLSRIFVANPVRRVTIKELKSHPWFLKNLPRELTEMAQAVYYRKEDPTFSLQSIEDIMNIVEEAKTPALVSWSIGGFGWGDEEEEDEEEETKEAAEAGEEDEYELRVKEAQASGEFHIS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0021 354 MobiDBLite consensus disorder prediction 314 333 - -
Lan16g0021 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan16g0021 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lan16g0021 354 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 348 - -
Lan16g0021 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0021 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0021 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan16g0021 354 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Lan16g0021 354 MobiDBLite consensus disorder prediction 314 354 - -
Lan16g0021 354 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lan16g0021 354 CDD STKc_SnRK2 3 259 - -
Lan16g0021 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lan16g0021 354 PANTHER SERINE/THREONINE KINASE 2 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0021 Lan-Chr16 106981 109560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0021 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 7.38e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan16g0021 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0021 K14498 - gmx:100812259 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0771 4 9769605 9772661 Lan16g0021 16 106981 109560 LSH
Lan19g1089 19 18026297 18029244 Lan16g0021 16 106981 109560 LSH