Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0018 ATGGCCGTACATACAAAATACCTTCTTATTACTTACTCTCAAGAGCTTGTGGACGGGCAGCCTATTTTTGTTTCTTCCAACTGTCTTCCGGTAAAGGCTTTGAAACTTGAACCTGCTGGCCATGCCTACCATTCTGCTGCACTTAAACTTCTTGGTGTTCAGGAAGATAATGGAGATGGTGCTCATAATAAAAAAGTGATTGGTGAAAAGGAAAGTAGTTATATCCCTTCATTTGATTCTTATAGCAGCAAGAGGAAGAATAAATCTGGTTCCGGAGACAAGCAGCAAGATCACTATGCATTATTGGGCCTTAGCCATTTAAGATATCTTGCTACAGAGGATCAGATACGGAAAAGCTACCGTGAAACTGCTTTGAGGTTTCACCCTGACAAACAAGCCGCTCTTATTCTTGCTGAGGAAACTGAAGCCACAAAGCAAGCAAAGAAGGATGAGATAGAAACTCACTTCAAGGCAATCCAGGAGTCATACGAGGTGTTGATTGATCCTGTGAAGAGAAGAATTTATGATTCCACAGATGAGTTTGACGATGAGATTCCCACTGATTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGCCCTGCTTTTATGAGGAACGGGCGGTGGTCAGTTAATCAACCGATGCCAACACTAGGTGATGATAATACATCATTGAAAGAAGTTGATAATTTCTATAACTTTTGGTACTCTTTTAAAAGCTGGAGGGAGTTTCCACATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAAGAGATGGATGGAAAGGCAGAACGCGAAACTGTCAGAGAAAGCTAGGAAGGAAGAATCTGTACGGATACGTATTCTTGTTGATAATGCTTATAAGAGGGACCCAAGAATTCTGAGAAGAAAAGAAGAGGAAAAAGCTGAGAAGCAAAGGAGAAAGCAGGCTAAGTACCTAGCAAAAAATTTACAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCGGCGAAAAGAGGAGGAGGAGAAAAAAACTGCAGAAGTTGCTTTGCAACAGAAGAAGGCGAAGGAGAAAGAGAAAAAGCTTTTGCGGAAGGAACGTGCACGTCTTCGAACTCTTTCGGGGCCTATTTTGTCACAGCATTTACTTGATAATTCTGATGATGATGTCGAAAATCTTTGCATGTCACTTGCTATTGACCAGCTGAGGGGTTTGTGTGAGAAAATTGAAGGTAAACCGGTCGTAGAGCAAGCGCAAGTTCTAAAAGATGCATTGAATGGTGAGAAATATGTGGTTGATAAGAAAGATCAGAATCCTGCCATTCAACAAAATGTTCCTGTCAAGGCTAATGTCAGTGCTTCTTTGCTAAGCAACTTTGAGAAGAAGGAGAGACCTTGGAATAAAGAAGAGATTGAGTTATTGAGGAAAGGAATGCTAAAATATCCGAAAGGAACTTCACGGAGATGGGAGGTCATTTCTGAATACATTGGTACTGGGAGATCAGTGGAAGAAATTTTGAAGGCAACTAAAACAGTTCTCCTCCAAAAGCCTGATTCTGCTAAAGCTTTTGATGCATTCCTCGAGAAAAGAAAGCCGGCTGCACAGATTGCATCTCCTCTGACAACCAGAGATGAATTAGAAGGGGCATCATCAGCACCAACTGCGGTGCAGCCTGAAAATAGCGGTACTGCTGCCACAGCACCAAATAACTTGGAAGACAATAATAGTAAGAAAAGCACAGATACTCAGGACTCTTCTGGTGGGTCTGTTATTGCAAATGGAGTTTCCTCTAGTTCAGAACAAGATGTGTGGTCTGCGGTACATGAAAGAGCATTGGTTCAAGCTTTGAAAACCTTCCCAAAGGAAACTAGCCAAAGATGGGAACGCGTTGCAGCATCTGTTCCTGGTAAGACTGTGAATCAGTGCAAGAAGAAATTTACCATGATGAAGGAGAGTTTCAGGAACAAGAAAAGTGCAGTTTAA 1977 0.4208 MAVHTKYLLITYSQELVDGQPIFVSSNCLPVKALKLEPAGHAYHSAALKLLGVQEDNGDGAHNKKVIGEKESSYIPSFDSYSSKRKNKSGSGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRFHPDKQAALILAEETEATKQAKKDEIETHFKAIQESYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPMPTLGDDNTSLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEESVRIRILVDNAYKRDPRILRRKEEEKAEKQRRKQAKYLAKNLQEEEAARIAEEERRRKEEEEKKTAEVALQQKKAKEKEKKLLRKERARLRTLSGPILSQHLLDNSDDDVENLCMSLAIDQLRGLCEKIEGKPVVEQAQVLKDALNGEKYVVDKKDQNPAIQQNVPVKANVSASLLSNFEKKERPWNKEEIELLRKGMLKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLQKPDSAKAFDAFLEKRKPAAQIASPLTTRDELEGASSAPTAVQPENSGTAATAPNNLEDNNSKKSTDTQDSSGGSVIANGVSSSSEQDVWSAVHERALVQALKTFPKETSQRWERVAASVPGKTVNQCKKKFTMMKESFRNKKSAV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0018 658 Pfam Myb-like DNA-binding domain 602 647 IPR001005 -
Lan16g0018 658 Gene3D - 457 514 - -
Lan16g0018 658 Gene3D - 592 658 - -
Lan16g0018 658 SUPERFAMILY Chaperone J-domain 95 203 IPR036869 -
Lan16g0018 658 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Lan16g0018 658 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 3 656 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lan16g0018 658 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Lan16g0018 658 CDD DnaJ 97 168 IPR001623 -
Lan16g0018 658 ProSiteProfiles Myb-like domain profile. 594 648 IPR001005 -
Lan16g0018 658 MobiDBLite consensus disorder prediction 542 593 - -
Lan16g0018 658 SUPERFAMILY Homeodomain-like 600 655 IPR009057 -
Lan16g0018 658 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 3 656 - -
Lan16g0018 658 SMART dnaj_3 96 171 IPR001623 -
Lan16g0018 658 MobiDBLite consensus disorder prediction 534 593 - -
Lan16g0018 658 ProSiteProfiles SANT domain profile. 597 652 IPR017884 -
Lan16g0018 658 CDD SANT 602 648 IPR001005 -
Lan16g0018 658 SMART sant 460 513 IPR001005 -
Lan16g0018 658 SMART sant 598 650 IPR001005 -
Lan16g0018 658 SUPERFAMILY Homeodomain-like 457 504 IPR009057 -
Lan16g0018 658 CDD SANT 463 503 IPR001005 -
Lan16g0018 658 Gene3D DnaJ domain 80 189 IPR036869 -
Lan16g0018 658 Coils Coil 298 371 - -
Lan16g0018 658 Pfam DnaJ domain 97 176 IPR001623 -
Lan16g0018 658 PRINTS DnaJ domain signature 102 120 IPR001623 -
Lan16g0018 658 PRINTS DnaJ domain signature 120 135 IPR001623 -
Lan16g0018 658 PRINTS DnaJ domain signature 151 171 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0018 Lan-Chr16 93059 98688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0018 89 297 C2H2 Transcription Factor Family AT1G74250 28.629 1.15e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan16g0018 DnaJ 2.6e-16 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0018 K09522 - gmx:100806665 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1093 19 18044514 18047791 Lan16g0018 16 93059 98688 LSH